version 0.17

Added read depth omission as visible option to usage message. Same for GRIDSS.

Version 0.16

Fixed GRIDSS parser to retain more information and report correct

chromosome name. Added extra option "-r" to omit the read depth check
for all events to speed up the run.

CLOVE 0.15

Added parsing of GRIDSS and Lumpy output

Release 0.14

Complex inversions in input data are handled correctly upon VCF output.

Updates to BedPE and VCF

• fixing parsing issue of bedpe input
• fixing output of bedpe VCF
• fixing tandem duplication SV tag

Minor Imporvements

• VCF output improvement
• Event support statistics in VCF
• Single variance value for -c parameter
• Bugfix for BedPe when no info field

Complete VCF ouput

After the initial release, which discarded events that didn't pass quality checks, this version reports all calls, but marks them as "PASS" or "FAIL" in the VCF.