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A research on sane and non intrusive file transference algorithms for Linux.

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SaneFileTransfer

This repository contains some Linux's file transference algorithms that explore Linux Dirty page fragility, at the moment it is mostly focused on transference to slow external devices and big single files. The project at the moment is a personal investigation on specific punctual problems and ideas and more an experiment than anything else, hope it is of any use for you.

The Problem

Most linux distros out there allow programs to allocate huge amounts of dirty pages before the kernel start writing them to disk and even bigger amounts until it start forcing writing synchronously. If the system have 32 GB of RAM, Kernel start to force synchronous writes only after you have 6.4 GB of dirty pages, holy saint Mary Jane, Batman! :)

Most of the time this runs really fine in modern days, the user setup is composed of relatively homogeneous speed devices. The problem start when you mix external, unreliable and slow devices... (samba, pendrives, slow external HDDs, etc) in system with plenty of RAM .

Most programs out there in Linux ecosystem (rsync, cp, nautilus, dolphin, etc) don't take this in consideration and just throw everything to Kernel pagging to manage. Lets see what happens in this scenario:

  • A 32 GB RAM setup;
  • Transferring a 6 GB file;
  • to a 40 MBps speed external device;

some problems you may face are:

  • bigger than needed CPU usage.
  • High pressure in source or and destiny device IO;
  • A big cache drop to store 6GB of dirty data for some minutes;
  • programs freeze, system may start trashing and in the worst case, goes down if you decide to issue an sync command;
  • The transference reaching 100% only some seconds after it start, generating confusion;
  • The transference "ending" before data really reach the external device, generating confusion when you try to umount;
  • Longer total time to transfer file, due do Kernel dirty page scheduling overhead (generally when dirty page gets to 1+ GB sizes);

This is not a new problem, There is some discussion around external devices and dirty page limits problems from time to time, an example is: The pernicious USB-stick stall problem

Possible Solutions

As seen in lwn.net, there are some ideas being discussed at kernel side that may or may not be implemented in the future, like separating dirty page limits per device, dividing the dirty page caching into some sort of writethrough and writeback caching system, one for normal partitions and other for external devices

Adjusting Dirty Limits

It is possible to reduce dirty page limits tuning vm.dirty_background_bytes and vm.dirty_bytes. The downside is that it affects system globally and so, affects all disks, including ones that may benefit from big dirty pages limits. In some cases it may affect sensitive programs that have tight IO demands like streaming/recording programs.

Tuning BDI (/sys/class/bdi//) devices min_ratio and max_ratio may help a bit but unfortunately, as this setting only takes effect after we have more than (dirty_background_ratio+dirty_ratio)/2 dirty data on RAM, the effect happens to be small if you are only writing to this device.

Limiting And Controlling Transference In Userspace

The program operating the transference itself can avoid abusing dirty page caching by throttling the transference dynamically, it add a bit of context switch overhead that gets to be compensated by reduced page cache overhead in kernel side. It makes transference progress more precise, reduce the amount of dirty pages awaiting to be written back to device and reduce system IO/CPU pressure, and avoids extra delays when unmounting the device. For optimal performance sendfile() syscall is used.

The transference start with a predefined buffer chunks size of 30MB and loops until transference is done. the buffer is dynamically adjusted acording to transference speed:

buffer_size =speed * 2;

After each chunk, fdsync() is issued to request that data be writen back to device until transference is completed.

Limitations And Improvements For The Future

  • Buffer size starting value and dynamic adjustment may get better (device profile detection).
  • Folders and multiple files transference.
  • Network device transference.
  • Other optimizations around copy_file_range, sparse files, parallel copying, etc.
  • Detection of the best scenarios where to use or not fdsync().

How To Build And Use

mkdir build
cd build
cmake ..
make

Now you can use the executable generated in build:

                                           Dirty Memory
                                                    execution time
                        |------------------------------------------------------------------------|
↑ 88.0 MB                                            │
│                                                    │
│                              │                     │
│                              │      │            │ │ │ │
│ 66.0 MB                      │      │            │ │ │ │ │
│                              │      │ │          │ │ │ │ │ │
│                              │      │ │          │ │ │ │ │ │
│                              │      │ │ │        │ │ │ │ │ │ │
│                              │      │ │ │        │ │ │ │ │ │ │ │ │     │                     │
│ 44.0 MB                      │ │    │ │ │ │    │ │ │ │ │ │ │ │ │ │     │ │                   │
│                          │   │ │    │ │ │ │    │ │ │ │ │ │ │ │ │ │ │ │ │ │ │               │ │
│                          │   │ │    │ │ │ │ │  │ │ │ │ │ │ │ │ │ │ │ │ │ │ │  │││    │ │ │ │ │
│                          ││  │ │    │ │ │ │ │ ││ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ││││    │ │ │ │ │
│ 22.0 MB                  ││ ││ │ │  │ │ │ │ │ ││ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │││││││ │ │ │ │ │
│                          ││ ││ │ │  │ │ │ │ │ ││││││ │ │ │ │ │ │ │ │ │ │ │ │ │││││││ │ │ │ │ │
│            ││││         │││ ││ │ ││ │ │ │ │ │ ││││││││ │ │ │ │ │ │ │ │ │ │ │ │││││││ │ │││││ │      │
│         ││││││││       ││││ ││││ ││││││ │ │ ││││││││││││││ │││ │ │ │ │ │ │ │││││││││ │ ││││││││││││││
│   ││││││││││││││   │││││││││││││ ││││││││ ││││││││││││││││││││ │ │ │ │ │ ││││││││││││││││││││││││││││
└─────────────────────────────────────────────────────────────────────────────────────────────────────→

$ time ./sane_file_transfer --alg1_sync /origin/test.iso /destiny/test.iso
Witen: 3383MB | 100% | 47.65MBps | 71.00sec
File copied successfully.

real    1m11,069s
user    0m0,000s
sys     0m5,322s

                                               Dirty Memory

                                                                       execution time        writeback 
                                                                 |----------------------| . . . . . . . .     
↑ 2898.0 MB                                                                       │                     
│                                                                                ││││                   
│                                                                               ││││││││                
│                                                                              │││││││││││              
│ 2173.5 MB                                                                   │││││││││││││││           
│                                                                            ││││││││││││││││││         
│                                                                           ││││││││││││││││││││││      
│                                                                          │││││││││││││││││││││││││    
│                                                                         ││││││││││││││││││││││││││││  
│ 1449.0 MB                                                               │││││││││││││││││││││││││││││
│                                                                        ││││││││││││││││││││││││││││││
│                                                                       │││││││││││││││││││││││││││││││
│                                                                      ││││││││││││││││││││││││││││││││
│ 724.5 MB                                                            │││││││││││││││││││││││││││││││││
│                                                                     │││││││││││││││││││││││││││││││││
│                                                                    ││││││││││││││││││││││││││││││││││
│                                                                   │││││││││││││││││││││││││││││││││││
│                                                                  ││││││││││││││││││││││││││││││││││││
└─────────────────────────────────────────────────────────────────────────────────────────────────────→

$ time ./sane_file_transfer --alg1_async /origin/test.iso /destiny/test.iso
Witen: 3383MB | 100% | 241.64MBps | 14.00sec
File copied successfully.

real    0m15,303s
user    0m0,000s
sys     0m5,468s

$ time ( ./sane_file_transfer --alg1_async /origin/test.iso /destiny/test.iso && sync )
Witen: 3383MB | 100% | 225.53MBps | 15.00sec
File copied successfully.

real    1m16,286s
user    0m0,002s
sys     0m6,213s

rsync, for comparison:

                                               Dirty Memory

                                           execution time                       writeback 
                                    |-------------------------| . . . . . . . . . . . . . . . . . . . |
↑ 2695.0 MB                                              │
│                                                       ││││
│                                                    │││││││││
│                                                   ││││││││││││
│ 2021.2 MB                                        ││││││││││││││││
│                                                ││││││││││││││││││││  
│                                               │││││││││││││││││││││││
│                                              │││││││││││││││││││││││││││
│                                             ││││││││││││││││││││││││││││││
│ 1347.5 MB                                  │││││││││││││││││││││││││││││││││
│                                           ││││││││││││││││││││││││││││││││││││
│                                          ││││││││││││││││││││││││││││││││││││││││
│                                         │││││││││││││││││││││││││││││││││││││││││││
│ 673.8 MB                               ││││││││││││││││││││││││││││││││││││││││││││││
│                                       ││││││││││││││││││││││││││││││││││││││││││││││││││  
│                                      │││││││││││││││││││││││││││││││││││││││││││││││││││││
│                                     ││││││││││││││││││││││││││││││││││││││││││││││││││││││││
│                                    ││││││││││││││││││││││││││││││││││││││││││││││││││││││││││││
└──────────────────────────────────────────────────────────────────────────────────────────────────────→

$ time rsync -avh --info=progress2 /origin/test.iso /destiny/test.iso
sending incremental file list
test.iso
3.55G 100%  162.03MB/s    0:00:20 (xfr#1, to-chk=0/1)

sent 3.55G bytes  received 35 bytes  173.08M bytes/sec
total size is 3.55G  speedup is 1.00

real    0m20,925s
user    0m11,743s
sys     0m5,021s

$ time ( rsync -avh --info=progress2 /origin/test.iso /destiny/test.iso && sync )
sending incremental file list
test.iso
3.55G 100%  152.21MB/s    0:00:22 (xfr#1, to-chk=0/1)

sent 3.55G bytes  received 35 bytes  157.70M bytes/sec
total size is 3.55G  speedup is 1.00

real    1m16,316s
user    0m11,570s
sys     0m5,859s

Plotting command (thanks to ttyplot):

$ while [[ 0 -eq 0 ]]; do echo $(( `cat /proc/meminfo | grep Dirty | tr -s ' ' | cut -d ' ' -f 2;`/1024 )); sleep 1; done | ttyplot -t 'Dirty Memory' -u 'MB'

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