How to use heatmap?

Open a Heatmap JSON file

1. Open nanoborb apps.

2. Open a slide.

1. Select File on the tool bar(top-left) and click on Open menu and open slide selection window.
   
2. On slide selection window, select a slide to open. User can use Files of Types select to filter slide type.
   

3. Select a data JSON File.

1. click on heatmap icon to open heatmap selection window.
   
2. On heatmap selection window, select a Heatmap JSON file to open Heatmap for the current silde.
   

Introduction Of Heatmap View

There are 6 tools on the toolbar at the top-left of the viewer.
From left to right, the tools are Heatmap controls, Magnifier, Measurement Tool, Side-by-side Viewer, Annotation Viewer, and Bug Report.

Operation on Heatmap:

1. Heatmap Control

1. Mode: there are Binal and Gradient modes.
   In Binal mode, a user can threshold properties by the combination.
   In Gradient mode, a user can threshold only one property.

2. Thresholding Properties:
   Using the range sliders to control the range of threshold for each property.

3. Opacity:
   The heat slider controls the opacity of the heatmap layer.
   The cover slider controls the opacity of the cover layer.
   Layers Structure:
           top
       -------------- heatmap layer
       -------------- cover layer
       -------------- slide layer
           bottom

2. Magnifier

3. Measurement Tool

4. Side-By-Side Viewer

5. Annotation

6. Bug Report

###TODO screen record

Sample Data for Heatmap

Sample Heatmap JSON File
Sample Slide

OTHERS

Heatmap Data Description
Heatmap Data Converter # convert quip2.0 heatmap to quip3.0 heatmap.