Update pipeline.Rmd try cut paste #56
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| name: Pipeline | |
| on: [push] | |
| jobs: | |
| rpipeline: | |
| runs-on: ubuntu-latest | |
| name: Pipeline | |
| steps: | |
| - name: Install Sqlite | |
| run: sudo apt install sqlite3 | |
| - name: Setup Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - name: Load R | |
| uses: r-lib/actions/setup-r@v2 | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Install dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| - name: Prepare R pipeline | |
| run: cd r; bash transform.sh | |
| - name: Run R pipeline | |
| run: cd r; Rscript pipeline.R | |
| - name: Run SQL pipeline | |
| run: cd sql; bash make.sh | |
| - name: Run output checks | |
| run: python python/check_output.py output/overview.csv | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| name: Pipeline Result | |
| path: output | |
| deploy: | |
| runs-on: ubuntu-latest | |
| environment: deploy | |
| name: Deploy | |
| if: github.ref == 'refs/heads/main' | |
| needs: [rpipeline] | |
| steps: | |
| - name: Trigger | |
| uses: peter-evans/repository-dispatch@v2 | |
| with: | |
| token: ${{ secrets.CROSS_TOKEN }} | |
| repository: SchmidtDSE/plastics-prototype | |
| event-type: data-update |