precompute finite value mask for kdtree query #1040
Workflow file for this run
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| name: Tests | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| if: github.repository == 'scitools/cartopy' | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| python-version: [3.9, '3.10', '3.11'] | |
| shapely-dev: [false] | |
| include: | |
| - os: ubuntu-latest | |
| python-version: '3.11' | |
| shapely-dev: true | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: test-environment | |
| python-version: ${{ matrix.python-version }} | |
| channels: conda-forge/label/testing,conda-forge | |
| - name: Minimum packages | |
| # Only run on Linux for now | |
| # Conda's linux packages don't grab the testing label of matplotlib causing failures due to freetype differences | |
| if: matrix.python-version == '3.9' && matrix.os == 'ubuntu-latest' | |
| id: minimum-packages | |
| run: | | |
| echo "PACKAGES=cython=0.29.24 matplotlib-base=3.4 numpy=1.21 owslib=0.24.1 pyproj=3.1 proj=8.0 scipy=1.6.3 shapely=1.7.1" >> $GITHUB_ENV | |
| - name: Latest packages | |
| if: steps.minimum-packages.conclusion == 'skipped' && !matrix.shapely-dev | |
| run: | | |
| echo "PACKAGES=cython fiona matplotlib-base numpy pyproj pykdtree scipy shapely" >> $GITHUB_ENV | |
| - name: Latest packages with Shapely dev | |
| if: steps.minimum-packages.conclusion == 'skipped' && matrix.shapely-dev | |
| run: | | |
| echo "PACKAGES=cython fiona matplotlib-base numpy pyproj pykdtree scipy geos" >> $GITHUB_ENV | |
| - name: Coverage packages | |
| id: coverage | |
| # only want the coverage to be run on the latest ubuntu | |
| if: matrix.python-version == '3.11' && matrix.os == 'ubuntu-latest' | |
| run: | | |
| echo "PACKAGES=$PACKAGES pytest-cov coveralls" >> $GITHUB_ENV | |
| echo "CYTHON_COVERAGE=1" >> $GITHUB_ENV | |
| echo "EXTRA_TEST_ARGS=--cov=cartopy -ra" >> $GITHUB_ENV | |
| - name: Install dependencies | |
| run: | | |
| PACKAGES="$PACKAGES owslib pep8 pillow pyshp pytest pytest-mpl!=0.16.0" | |
| PACKAGES="$PACKAGES pytest-xdist setuptools_scm" | |
| conda install $PACKAGES | |
| conda info -a | |
| conda list | |
| - name: Install Shapely dev | |
| if: matrix.shapely-dev | |
| run: | | |
| python -m pip install git+https://github.com/shapely/shapely.git@main | |
| - name: Install Cartopy | |
| id: install | |
| run: | | |
| MPL_CONFIG_DIR=~/.config/matplotlib | |
| mkdir -p $MPL_CONFIG_DIR | |
| echo "backend : agg" > $MPL_CONFIG_DIR/matplotlibrc | |
| pip install --no-deps -e . | |
| python -c "import cartopy; print('Version ', cartopy.__version__)" | |
| - name: Testing | |
| id: test | |
| run: | | |
| # Check that the downloader tool at least knows where to get the data from (but don't actually download it) | |
| python tools/cartopy_feature_download.py gshhs physical --dry-run | |
| CARTOPY_GIT_DIR=$PWD | |
| PYPROJ_GLOBAL_CONTEXT=ON pytest -ra -n 4 --doctest-modules \ | |
| --color=yes \ | |
| --mpl --mpl-generate-summary=html \ | |
| --mpl-results-path="cartopy_test_output-${{ matrix.os }}-${{ matrix.python-version }}" \ | |
| --pyargs cartopy ${EXTRA_TEST_ARGS} | |
| - name: Coveralls | |
| if: steps.coverage.conclusion == 'success' | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | |
| coveralls --service=github | |
| - name: Upload image results | |
| uses: actions/upload-artifact@v3 | |
| if: failure() | |
| with: | |
| name: image-failures-${{ matrix.os }}-${{ matrix.python-version }} | |
| path: cartopy_test_output-${{ matrix.os }}-${{ matrix.python-version }} |