Resolve BepInEx plugins being destroyed

Dependencies/BZ.EXP/BepInEx.cfg

@@ -0,0 +1,16 @@
+[Preloader.Entrypoint]
+
+## The local filename of the assembly to target.
+# Setting type: String
+# Default value: UnityEngine.CoreModule.dll
+Assembly = Assembly-CSharp.dll
+
+## The name of the type in the entrypoint assembly to search for the entrypoint method.
+# Setting type: String
+# Default value: Application
+Type = PreStartScreen
+
+## The name of the method in the specified entrypoint assembly and type to hook and load Chainloader from.
+# Setting type: String
+# Default value: .cctor
+Method = Start

Dependencies/BZ.STABLE/BepInEx.cfg

@@ -0,0 +1,16 @@
+[Preloader.Entrypoint]
+
+## The local filename of the assembly to target.
+# Setting type: String
+# Default value: UnityEngine.CoreModule.dll
+Assembly = Assembly-CSharp.dll
+
+## The name of the type in the entrypoint assembly to search for the entrypoint method.
+# Setting type: String
+# Default value: Application
+Type = PreStartScreen
+
+## The name of the method in the specified entrypoint assembly and type to hook and load Chainloader from.
+# Setting type: String
+# Default value: .cctor
+Method = Start

Dependencies/SN.EXP/BepInEx.cfg

@@ -0,0 +1,16 @@
+[Preloader.Entrypoint]
+
+## The local filename of the assembly to target.
+# Setting type: String
+# Default value: UnityEngine.CoreModule.dll
+Assembly = Assembly-CSharp.dll
+
+## The name of the type in the entrypoint assembly to search for the entrypoint method.
+# Setting type: String
+# Default value: Application
+Type = PreStartScreen
+
+## The name of the method in the specified entrypoint assembly and type to hook and load Chainloader from.
+# Setting type: String
+# Default value: .cctor
+Method = Start

Dependencies/SN.STABLE/BepInEx.cfg

@@ -0,0 +1,16 @@
+[Preloader.Entrypoint]
+
+## The local filename of the assembly to target.
+# Setting type: String
+# Default value: UnityEngine.CoreModule.dll
+Assembly = Assembly-CSharp.dll
+
+## The name of the type in the entrypoint assembly to search for the entrypoint method.
+# Setting type: String
+# Default value: Application
+Type = SystemsSpawner
+
+## The name of the method in the specified entrypoint assembly and type to hook and load Chainloader from.
+# Setting type: String
+# Default value: .cctor
+Method = Awake

Installer/BZ.EXP.iss

@@ -76,6 +76,7 @@ Source: "QModManager.UnityAudioFixer.xml"; DestDir: "{app}\BepInEx\patchers\QMod
 
 ; BepInEx
 Source: "..\..\Dependencies\BepInEx\*"; DestDir: "{app}"; Flags: recursesubdirs createallsubdirs replacesameversion sharedfile uninsnosharedfileprompt;
+Source: "..\..\Dependencies\BZ.EXP\BepInEx.cfg"; DestDir: "{app}\BepInEx\config"; Flags: ignoreversion sharedfile uninsnosharedfileprompt;
 
 [Dirs]
 Name: "{app}\QMods"

Installer/BZ.STABLE.iss

@@ -76,6 +76,7 @@ Source: "QModManager.UnityAudioFixer.xml"; DestDir: "{app}\BepInEx\patchers\QMod
 
 ; BepInEx
 Source: "..\..\Dependencies\BepInEx\*"; DestDir: "{app}"; Flags: recursesubdirs createallsubdirs replacesameversion sharedfile uninsnosharedfileprompt;
+Source: "..\..\Dependencies\BZ.STABLE\BepInEx.cfg"; DestDir: "{app}\BepInEx\config"; Flags: ignoreversion sharedfile uninsnosharedfileprompt;
 
 [Dirs]
 Name: "{app}\QMods"

Installer/SN.EXP.iss

@@ -76,6 +76,7 @@ Source: "QModManager.UnityAudioFixer.xml"; DestDir: "{app}\BepInEx\patchers\QMod
 
 ; BepInEx
 Source: "..\..\Dependencies\BepInEx\*"; DestDir: "{app}"; Flags: recursesubdirs createallsubdirs replacesameversion sharedfile uninsnosharedfileprompt;
+Source: "..\..\Dependencies\SN.EXP\BepInEx.cfg"; DestDir: "{app}\BepInEx\config"; Flags: ignoreversion sharedfile uninsnosharedfileprompt;
 
 [Dirs]
 Name: "{app}\QMods"

Installer/SN.STABLE.iss

@@ -74,6 +74,7 @@ Source: "QModManager.UnityAudioFixer.xml"; DestDir: "{app}\BepInEx\patchers\QMod
 
 ; BepInEx
 Source: "..\..\Dependencies\BepInEx\*"; DestDir: "{app}"; Flags: recursesubdirs createallsubdirs replacesameversion sharedfile uninsnosharedfileprompt;
+Source: "..\..\Dependencies\SN.STABLE\BepInEx.cfg"; DestDir: "{app}\BepInEx\config"; Flags: ignoreversion sharedfile uninsnosharedfileprompt;
 
 [Dirs]
 Name: "{app}\QMods"

QModManager/BepInex/Plugins/QMMLoader.cs

@@ -1,9 +1,19 @@
 using BepInEx;
-using System;
+#if !SUBNAUTICA_STABLE
+using HarmonyLib;
+#if !BELOWZERO
+using System.Collections;
+#endif
+#endif
+using System.Collections.Generic;
 using UnityEngine;
 
 namespace QModInstaller.BepInEx.Plugins
 {
+    using QModManager.API.ModLoading;
+    using QModManager.Patching;
+    using QModManager.Utility;
+
     /// <summary>
     /// QMMLoader - simply fires up the QModManager entry point.
     /// </summary>
@@ -15,6 +25,9 @@ public class QMMLoader : BaseUnityPlugin
         internal const string PluginName = "QMMLoader";
         internal const string PluginVersion = "4.1.4";
 
+        internal static List<QMod> QModsToLoad;
+        private static Initializer Initializer;
+
         /// <summary>
         /// Prevents a default instance of the <see cref="QMMLoader"/> class from being created 
         /// Also ensures the root bepinex object does not get destroyed if the game reloads for steam.
@@ -24,10 +37,87 @@ private void Awake()
             GameObject obj = gameObject;
 
             while (obj.transform.parent?.gameObject != null)
+            {
                 obj = obj.transform.parent.gameObject;
+            }
 
             obj.EnsureComponent<SceneCleanerPreserve>();
             DontDestroyOnLoad(obj);
+
+            PreInitializeQMods();
+        }
+
+        private void PreInitializeQMods()
+        {
+            Patcher.Patch(); // Run QModManager patch
+
+            if (QModsToLoad is null)
+            {
+                Logger.LogWarning("QModsToLoad is null!");
+                return;
+            }
+
+            Initializer = new Initializer(Patcher.CurrentlyRunningGame);
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.MetaPreInitialize);
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.PreInitialize);
+
+#if SUBNAUTICA_STABLE
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.NormalInitialize);
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.PostInitialize);
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.MetaPostInitialize);
+
+            SummaryLogger.ReportIssues(QModsToLoad);
+            SummaryLogger.LogSummaries(QModsToLoad);
+            foreach (Dialog dialog in Patcher.Dialogs)
+            {
+                dialog.Show();
+            }
+#else
+            var harmony = new Harmony(PluginGuid);
+            harmony.Patch(
+                AccessTools.Method(
+#if SUBNAUTICA
+                    typeof(PlatformUtils), nameof(PlatformUtils.PlatformInitAsync)
+#elif BELOWZERO
+                    typeof(SpriteManager), nameof(SpriteManager.OnLoadedSpriteAtlases)
+#endif
+                    ),
+                    postfix: new HarmonyMethod(AccessTools.Method(typeof(QMMLoader), nameof(QMMLoader.InitializeQMods)))
+                );
+#endif
+        }
+
+#if SUBNAUTICA_EXP
+        private static IEnumerator InitializeQMods(IEnumerator result)
+        {
+            yield return result;
+
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.NormalInitialize);
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.PostInitialize);
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.MetaPostInitialize);
+
+            SummaryLogger.ReportIssues(QModsToLoad);
+            SummaryLogger.LogSummaries(QModsToLoad);
+            foreach (Dialog dialog in Patcher.Dialogs)
+            {
+                dialog.Show();
+            }
+        }
+#elif BELOWZERO
+        private static void InitializeQMods() 
+        {
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.NormalInitialize);
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.PostInitialize);
+            Initializer.InitializeMods(QModsToLoad, PatchingOrder.MetaPostInitialize);
+
+            SummaryLogger.ReportIssues(QModsToLoad);
+            SummaryLogger.LogSummaries(QModsToLoad);
+
+            foreach (Dialog dialog in Patcher.Dialogs)
+            {
+                dialog.Show();
+            }
         }
+#endif
     }
 }

QModManager/QModManager.csproj

@@ -78,10 +78,6 @@
       <HintPath>..\Dependencies\$(Configuration)\Newtonsoft.Json.dll</HintPath>
       <Private>False</Private>
     </Reference>
-    <Reference Include="Sentry">
-      <HintPath>..\Dependencies\$(Configuration)\Sentry.dll</HintPath>
-      <Private>False</Private>
-    </Reference>
     <Reference Include="System" />
     <Reference Include="UnityEngine">
       <HintPath>..\Dependencies\$(Configuration)\UnityEngine.dll</HintPath>
@@ -112,6 +108,12 @@
       <Private>False</Private>
     </Reference>
   </ItemGroup>
+  <ItemGroup Condition="'$(Configuration)' == 'BZ.EXP'">
+    <Reference Include="Sentry">
+      <HintPath>..\Dependencies\$(Configuration)\Sentry.dll</HintPath>
+      <Private>False</Private>
+    </Reference>
+  </ItemGroup>
   <ItemGroup>
     <Compile Include="API\IQMod.cs" />
     <Compile Include="API\IQModAPI.cs" />

QModPluginEmulator/QModManager.QModPluginGenerator.csproj

@@ -89,6 +89,8 @@
   <PropertyGroup>
     <PostBuildEvent>rmdir "$(SolutionDir)VortexBuild\$(Configuration)" /q /s
 xcopy "$(SolutionDir)Dependencies\BepInEx" "$(SolutionDir)VortexBuild\$(Configuration)"  /E /H /I /Q /Y
+xcopy "$(SolutionDir)Dependencies\$(Configuration)\BepInEx.cfg" "$(SolutionDir)VortexBuild\$(Configuration)\BepInEx\config\"  /I /Q /Y
+mkdir "$(SolutionDir)VortexBuild\$(Configuration)\QMods"
 xcopy "$(SolutionDir)Dependencies\cldb.dat" "$(SolutionDir)VortexBuild\$(Configuration)\BepInEx\patchers\QModManager\" /I /Q /Y
 xcopy "$(SolutionDir)packages\AssetsTools.NET.2.0.3\lib\net35\AssetsTools.NET.dll" "$(SolutionDir)VortexBuild\$(Configuration)\BepInEx\patchers\QModManager\" /I /Q /Y
 xcopy "$(TargetDir)QModManager.exe" "$(SolutionDir)VortexBuild\$(Configuration)\BepInEx\patchers\QModManager\"   /I /Q /Y
@@ -105,7 +107,7 @@ xcopy "$(TargetDir)QModManager.OculusNewtonsoftRedirect.dll" "$(SolutionDir)Vort
 xcopy "$(TargetDir)QModInstaller.dll" "$(SolutionDir)VortexBuild\$(Configuration)\BepInEx\plugins\QModManager\"  /I /Q /Y
 xcopy "$(TargetDir)QModInstaller.xml" "$(SolutionDir)VortexBuild\$(Configuration)\BepInEx\plugins\QModManager\"   /I /Q /Y
 
-powershell Compress-Archive -Path '$(SolutionDir)VortexBuild\$(Configuration)\Bepinex' -DestinationPath '$(SolutionDir)VortexBuild\QModManager_$(Configuration).zip' -Force
+powershell Compress-Archive -Path '$(SolutionDir)VortexBuild\$(Configuration)\BepInEx' -DestinationPath '$(SolutionDir)VortexBuild\QModManager_$(Configuration).zip' -Force
 powershell Compress-Archive -LiteralPath '$(SolutionDir)VortexBuild\$(Configuration)\doorstop_config.ini', '$(SolutionDir)VortexBuild\$(Configuration)\winhttp.dll' -DestinationPath '$(SolutionDir)VortexBuild\QModManager_$(Configuration).zip' -Update
 
 echo F|xcopy /S /Q /Y /F  "$(SolutionDir)Installer\$(Configuration).iss" "$(TargetDir)\QModsInstallerScript.iss"