Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Type design for PhasePoint and DualValue. #51

Merged
merged 56 commits into from
May 20, 2019
Merged

Type design for PhasePoint and DualValue. #51

merged 56 commits into from
May 20, 2019

Commits on Apr 16, 2019

  1. add Parameters to REQUIRE

    @yebai
    yebai committed Apr 16, 2019
    Configuration menu
    Copy the full SHA
    a8166ea View commit details
    Browse the repository at this point in the history

  2. Draft type design for PhasePoint and LogDensity.

    @yebai
    yebai committed Apr 16, 2019
    Configuration menu
    Copy the full SHA
    e596c03 View commit details
    Browse the repository at this point in the history

Commits on Apr 17, 2019

  1. Merge branch 'master' into hg/some-type-refactoring

    @yebai
    yebai authored Apr 17, 2019
    Configuration menu
    Copy the full SHA
    07ad3bd View commit details
    Browse the repository at this point in the history

  2. Renamed some types.

    @yebai
    yebai committed Apr 17, 2019
    Configuration menu
    Copy the full SHA
    9c3be85 View commit details
    Browse the repository at this point in the history

  3. Added cache for kinect energy.

    @yebai
    yebai committed Apr 17, 2019
    Configuration menu
    Copy the full SHA
    8134f50 View commit details
    Browse the repository at this point in the history

  4. Added some comments.

    @yebai
    yebai committed Apr 17, 2019
    Configuration menu
    Copy the full SHA
    01adeb4 View commit details
    Browse the repository at this point in the history

  5. Merge Sampler.step into Sampler.sample.

    @yebai
    yebai committed Apr 17, 2019
    Configuration menu
    Copy the full SHA
    d464a74 View commit details
    Browse the repository at this point in the history

  6. Typo fix.

    @yebai
    yebai committed Apr 17, 2019
    Configuration menu
    Copy the full SHA
    90804f2 View commit details
    Browse the repository at this point in the history

  7. Moved step function into trajectory.

    @yebai
    yebai committed Apr 17, 2019
    Configuration menu
    Copy the full SHA
    7d09b1d View commit details
    Browse the repository at this point in the history

  8. Fix leftover bug after merging sampler.step.

    @yebai
    yebai committed Apr 17, 2019
    Configuration menu
    Copy the full SHA
    a121843 View commit details
    Browse the repository at this point in the history

Commits on Apr 18, 2019

  1. Added types for MHStats, and NUTS.

    @yebai
    yebai committed Apr 18, 2019
    Configuration menu
    Copy the full SHA
    fdfb80b View commit details
    Browse the repository at this point in the history

  2. Relaxed type constraint for PhasePoint.

    @yebai
    yebai committed Apr 18, 2019
    Configuration menu
    Copy the full SHA
    cb277af View commit details
    Browse the repository at this point in the history

  3. Add dependency on ArgCheck.

    @yebai
    yebai committed Apr 18, 2019
    Configuration menu
    Copy the full SHA
    e794add View commit details
    Browse the repository at this point in the history

  4. Switch to PhasePoint . 

    Fixed a minor bug in find_good_eps: see L250.
    @yebai
    yebai committed Apr 18, 2019
    Configuration menu
    Copy the full SHA
    ffb3327 View commit details
    Browse the repository at this point in the history

  5. Use PhasePoint in transition.

    @yebai
    yebai committed Apr 18, 2019
    Configuration menu
    Copy the full SHA
    6216579 View commit details
    Browse the repository at this point in the history

Commits on Apr 19, 2019

  1. Merge branch 'master' into hg/some-type-refactoring 

    # Conflicts:
#	REQUIRE
    @yebai
    yebai committed Apr 19, 2019
    Configuration menu
    Copy the full SHA
    1a8bf7e View commit details
    Browse the repository at this point in the history

Commits on Apr 20, 2019

  1. Merge branch 'master' into hg/some-type-refactoring

    @yebai
    yebai authored Apr 20, 2019
    Configuration menu
    Copy the full SHA
    c0c1130 View commit details
    Browse the repository at this point in the history

  2. Create REQUIRE

    @yebai
    yebai authored Apr 20, 2019
    Configuration menu
    Copy the full SHA
    0ce89ea View commit details
    Browse the repository at this point in the history

  3. Update Project.toml

    @yebai
    yebai authored Apr 20, 2019
    Configuration menu
    Copy the full SHA
    b5829b3 View commit details
    Browse the repository at this point in the history

  4. Update REQUIRE

    @yebai
    yebai authored Apr 20, 2019
    Configuration menu
    Copy the full SHA
    e330bbe View commit details
    Browse the repository at this point in the history

  5. Update Project.toml

    @yebai
    yebai authored Apr 20, 2019
    Configuration menu
    Copy the full SHA
    512c2ec View commit details
    Browse the repository at this point in the history

Commits on Apr 24, 2019

  1. Merge branch 'master' into hg/some-type-refactoring 

    # Conflicts:
#	src/trajectory.jl
    @yebai
    yebai committed Apr 24, 2019
    Configuration menu
    Copy the full SHA
    76d14e5 View commit details
    Browse the repository at this point in the history

  2. Fix dependency.

    @yebai
    yebai committed Apr 24, 2019
    Configuration menu
    Copy the full SHA
    06b7e81 View commit details
    Browse the repository at this point in the history

  3. RM Manifest.toml file.

    @yebai
    yebai committed Apr 24, 2019
    Configuration menu
    Copy the full SHA
    652854c View commit details
    Browse the repository at this point in the history

  4. Added numerical checking to PhasePoint.

    @yebai
    yebai committed Apr 24, 2019
    Configuration menu
    Copy the full SHA
    52384a4 View commit details
    Browse the repository at this point in the history

  5. Typo fix.

    @yebai
    yebai committed Apr 24, 2019
    Configuration menu
    Copy the full SHA
    3ff7076 View commit details
    Browse the repository at this point in the history

Commits on May 13, 2019

  1. Merge branch 'master' into hg/some-type-refactoring 

    # Conflicts:
#	Project.toml
#	src/metric.jl
#	src/sampler.jl
#	src/trajectory.jl
#	test/integrator.jl
    @yebai
    yebai committed May 13, 2019
    Configuration menu
    Copy the full SHA
    5d6856c View commit details
    Browse the repository at this point in the history

  2. Re-formatting - no functionality change.

    @yebai
    yebai committed May 13, 2019
    Configuration menu
    Copy the full SHA
    875404b View commit details
    Browse the repository at this point in the history

  3. Re-formating - no functionality change.

    @yebai
    yebai committed May 13, 2019
    Configuration menu
    Copy the full SHA
    11e9cdb View commit details
    Browse the repository at this point in the history

  4. Removed some obsolete types.

    @yebai
    yebai committed May 13, 2019
    Configuration menu
    Copy the full SHA
    6725144 View commit details
    Browse the repository at this point in the history

  5. Re-formating - no functionality change.

    @yebai
    yebai committed May 13, 2019
    Configuration menu
    Copy the full SHA
    d879b95 View commit details
    Browse the repository at this point in the history

  6. Remove n_valid.

    @yebai
    yebai committed May 13, 2019
    Configuration menu
    Copy the full SHA
    2edfd4c View commit details
    Browse the repository at this point in the history

Commits on May 16, 2019

  1. Refactor leapfrog step function.

    @yebai
    yebai committed May 16, 2019
    Configuration menu
    Copy the full SHA
    486dc38 View commit details
    Browse the repository at this point in the history

  2. Cleanup.

    @yebai
    yebai committed May 16, 2019
    Configuration menu
    Copy the full SHA
    7f7bed2 View commit details
    Browse the repository at this point in the history

  3. More refactoring in rand momentum.

    @yebai
    yebai committed May 16, 2019
    Configuration menu
    Copy the full SHA
    60dea85 View commit details
    Browse the repository at this point in the history

  4. Cleanup.

    @yebai
    yebai committed May 16, 2019
    Configuration menu
    Copy the full SHA
    fb935d6 View commit details
    Browse the repository at this point in the history

Commits on May 17, 2019

  1. Removed some comments.

    @yebai
    yebai committed May 17, 2019
    Configuration menu
    Copy the full SHA
    596420b View commit details
    Browse the repository at this point in the history

  2. More cleanup.

    @yebai
    yebai committed May 17, 2019
    Configuration menu
    Copy the full SHA
    9ceef64 View commit details
    Browse the repository at this point in the history

  3. Refactor: use phasepoint in build_tree.

    @yebai
    yebai committed May 17, 2019
    Configuration menu
    Copy the full SHA
    56766d6 View commit details
    Browse the repository at this point in the history

  4. Cleanup.

    @yebai
    yebai committed May 17, 2019
    Configuration menu
    Copy the full SHA
    b56a3ca View commit details
    Browse the repository at this point in the history

  5. Cleanup.

    @yebai
    yebai committed May 17, 2019
    Configuration menu
    Copy the full SHA
    e5375fe View commit details
    Browse the repository at this point in the history

  6. Rename prop to τ.

    @yebai
    yebai committed May 17, 2019
    Configuration menu
    Copy the full SHA
    ae3dfbd View commit details
    Browse the repository at this point in the history

  7. Cleanup.

    @yebai
    yebai committed May 17, 2019
    Configuration menu
    Copy the full SHA
    ef162d1 View commit details
    Browse the repository at this point in the history

  8. Bugfix.

    @yebai
    yebai committed May 17, 2019
    Configuration menu
    Copy the full SHA
    68f733a View commit details
    Browse the repository at this point in the history

Commits on May 18, 2019

  1. Fixed some type issues.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    be734f0 View commit details
    Browse the repository at this point in the history

  2. Re-formatting - no functionality change.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    0f04825 View commit details
    Browse the repository at this point in the history

  3. Minor tweak of numerical error message.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    c7c0442 View commit details
    Browse the repository at this point in the history

  4. kinetic_energy ==> neg_energy

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    067b88d View commit details
    Browse the repository at this point in the history

  5. potential_energy ==> neg_energy and bugfixes.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    aa484a0 View commit details
    Browse the repository at this point in the history

  6. Re-formatting - no functionality change.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    16599d4 View commit details
    Browse the repository at this point in the history

  7. Rename logπ and logκ with ℓπ, ℓκ.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    6f01571 View commit details
    Browse the repository at this point in the history

  8. Cleanup + bugfix.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    435ac08 View commit details
    Browse the repository at this point in the history

  9. ∂logπ∂θ ==> ∂ℓπ∂θ.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    c6616d7 View commit details
    Browse the repository at this point in the history

  10. Cleanup - no functionality change.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    32115a5 View commit details
    Browse the repository at this point in the history

  11. Removed an obsolete comment.

    @yebai
    yebai committed May 18, 2019
    Configuration menu
    Copy the full SHA
    502c9ef View commit details
    Browse the repository at this point in the history

Commits on May 20, 2019

  1. test @warn in the constructor of PhasePoint

    @xukai92
    xukai92 committed May 20, 2019
    Configuration menu
    Copy the full SHA
    0d4aed3 View commit details
    Browse the repository at this point in the history