Beastiary is designed for visualising and analysing MCMC trace files generated from Bayesian phylogenetic analyses. Beastiary works in real-time and on remote servers (e.g. a HPC). The goal of Beastiary is to be a beautiful and simple yet powerful tool for Bayesian phylogenetic inference. A beastiary (from bestiarum vocabulum) is a compendium of beasts.

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Paper: Wirth & Duchene (2022)

Documentation: https://beastiary.wytamma.com

Source Code: https://github.com/Wytamma/beastiary

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Install

pip install beastiary

Use

To start beastiary use the beastiary command.

beastiary

For more information read the docs.

Cite

Wytamma Wirth, Sebastian Duchene, Real-Time and Remote MCMC Trace Inspection with Beastiary, Molecular Biology and Evolution, Volume 39, Issue 5, May 2022, msac095, https://doi.org/10.1093/molbev/msac095