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Issues list

Trouble with using 'circ_quant' function (CLEAR with STAR Alignment)
#23 opened Jun 16, 2024 by jennynuyirs
Problem with pysam: ValueError: fetch called on bamfile without index
#22 opened Mar 12, 2024 by BenNiLu
1
CLEAR: python2 or python3?
#21 opened Sep 23, 2022 by nliorni
3
IOError: [Errno 2] No such file or directory: circ/genePred.tmp
#20 opened Jan 22, 2022 by lssb
3
NO quant or circular output
#19 opened Sep 23, 2021 by lbwfff
2
TypeError when Running CLEAR: 'NoneType' object is not iterable
#18 opened Jul 21, 2021 by JerryZhang-1222
1
tophat fusion error
#16 opened Jan 9, 2021 by sharmi85
2
exonFrames field is being added, -genePredExt but no valid frames
#13 opened Dec 28, 2020 by sharmi85
6
Tophat-fusion error
#10 opened Jun 5, 2020 by bounlu
7
FPBcirc vs FPBlinear comparison from different sequencing data
#8 opened Jun 3, 2020 by bounlu
CLEAR availability in anaconda
#7 opened Jun 2, 2020 by bounlu
ProTip! no:milestone will show everything without a milestone.