v0.5.1: fix updateSamples and tests #180
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| name: Linux | |
| on: | |
| push: | |
| branches: [ main, doc ] | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| - name: install dependency | |
| run: | | |
| sudo apt update | |
| sudo apt-get update | |
| sudo apt-get -qy install build-essential zlib1g zlib1g-dev curl libcurl4-openssl-dev lzma-dev liblzma-dev libeigen3-dev | |
| - name: install htslib | |
| run: | | |
| git clone --recursive https://github.com/samtools/htslib.git | |
| cd htslib && autoreconf -i && ./configure --enable-libcurl | |
| sudo make -j6 install | |
| sudo ldconfig | |
| cd - | |
| - name: unit test | |
| run: | | |
| cd test | |
| # export ASAN_OPTIONS=alloc_dealloc_mismatch=0 | |
| make | |
| make test | |
| # find . -name "*.bin" -exec '{}' --success ';' | |
| - name: tools test | |
| run: | | |
| cd tools | |
| make -j6 | |
| make test |