Postgres source: handle terminate connection exception with test. #19887

sashaNeshcheret · 2022-11-29T17:53:03Z

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PR name follows PR naming conventions
If adding a new generator, add it to the list of scaffold modules being tested
The generator test modules (all connectors with -scaffold in their name) have been updated with the latest scaffold by running ./gradlew :airbyte-integrations:connector-templates:generator:testScaffoldTemplates then checking in your changes
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…rminate-connection-exeption

github-actions · 2022-11-29T17:54:27Z

Affected Connector Report

NOTE ⚠️ Changes in this PR affect the following connectors. Make sure to do the following as needed:

Run integration tests
Bump connector or module version
Add changelog
Publish the new version

⚠ Sources (31)

Connector	Version	Changelog	Publish
`source-alloydb`	`1.0.17`	✅	✅
`source-alloydb-strict-encrypt`	`1.0.17`	✅	🔵 (ignored)
`source-bigquery`	`0.2.3`	✅	✅
`source-clickhouse`	`0.1.14`	✅	✅
`source-clickhouse-strict-encrypt`	`0.1.14`	✅	🔵 (ignored)
`source-cockroachdb`	`0.1.18`	✅	✅
`source-cockroachdb-strict-encrypt`	`0.1.18`	✅	🔵 (ignored)
`source-db2`	`0.1.16`	✅	✅
`source-db2-strict-encrypt`	`0.1.16`	✅	🔵 (ignored)
`source-dynamodb`	`0.1.0`	✅	✅
`source-e2e-test`	`2.1.3`	✅	✅
`source-e2e-test-cloud`	`2.1.1`	⚠ (doc not found)	⚠ (not in seed)
`source-elasticsearch`	`0.1.1`	✅	✅
`source-jdbc`	`0.3.5`	⚠ (doc not found)	⚠ (not in seed)
`source-kafka`	`0.2.3`	✅	✅
`source-mongodb-strict-encrypt`	`0.1.19`	⚠ (doc not found)	🔵 (ignored)
`source-mongodb-v2`	`0.1.19`	✅	✅
`source-mssql`	`0.4.25`	✅	✅
`source-mssql-strict-encrypt`	`0.4.25`	✅	🔵 (ignored)
`source-mysql`	`1.0.15`	✅	✅
`source-mysql-strict-encrypt`	`1.0.15`	✅	🔵 (ignored)
`source-oracle`	`0.3.21`	✅	✅
`source-oracle-strict-encrypt`	`0.3.21`	✅	🔵 (ignored)
`source-postgres`	`1.0.30`	✅	✅
`source-postgres-strict-encrypt`	`1.0.30`	✅	🔵 (ignored)
`source-redshift`	`0.3.15`	✅	✅
`source-relational-db`	`0.3.1`	⚠ (doc not found)	⚠ (not in seed)
`source-scaffold-java-jdbc`	`0.1.0`	⚠ (doc not found)	⚠ (not in seed)
`source-sftp`	`0.1.2`	✅	✅
`source-snowflake`	`0.1.26`	✅	✅
`source-tidb`	`0.2.1`	✅	✅

See "Actionable Items" below for how to resolve warnings and errors.

❌ Destinations (46)

Connector	Version	Changelog	Publish
`destination-azure-blob-storage`	`0.1.6`	⚠ (doc not found)	✅
`destination-bigquery`	`1.2.8`	✅	✅
`destination-bigquery-denormalized`	`1.2.8`	❌ (changelog missing)	✅
`destination-cassandra`	`0.1.4`	✅	✅
`destination-clickhouse`	`0.2.1`	✅	✅
`destination-clickhouse-strict-encrypt`	❌ `0.2.0` (mismatch: `0.2.1`)	✅	🔵 (ignored)
`destination-csv`	`0.2.10`	✅	✅
`destination-databricks`	`0.3.1`	✅	✅
`destination-dev-null`	`0.2.7`	✅	🔵 (ignored)
`destination-doris`	`0.1.0`	✅	✅
`destination-dynamodb`	`0.1.7`	✅	✅
`destination-e2e-test`	`0.2.4`	✅	✅
`destination-elasticsearch`	`0.1.6`	✅	✅
`destination-elasticsearch-strict-encrypt`	`0.1.6`	✅	🔵 (ignored)
`destination-gcs`	`0.2.12`	✅	✅
`destination-iceberg`	`0.1.0`	✅	✅
`destination-jdbc`	`0.3.14`	⚠ (doc not found)	🔵 (ignored)
`destination-kafka`	`0.1.10`	✅	✅
`destination-keen`	`0.2.4`	✅	✅
`destination-kinesis`	`0.1.5`	✅	✅
`destination-local-json`	`0.2.11`	✅	✅
`destination-mariadb-columnstore`	`0.1.7`	✅	✅
`destination-mongodb`	`0.1.9`	✅	✅
`destination-mongodb-strict-encrypt`	`0.1.9`	✅	🔵 (ignored)
`destination-mqtt`	`0.1.3`	✅	✅
`destination-mssql`	`0.1.22`	✅	✅
`destination-mssql-strict-encrypt`	`0.1.22`	✅	🔵 (ignored)
`destination-mysql`	`0.1.20`	✅	✅
`destination-mysql-strict-encrypt`	❌ `0.1.21` (mismatch: `0.1.20`)	✅	🔵 (ignored)
`destination-oracle`	`0.1.19`	✅	✅
`destination-oracle-strict-encrypt`	`0.1.19`	✅	🔵 (ignored)
`destination-postgres`	`0.3.26`	✅	✅
`destination-postgres-strict-encrypt`	`0.3.26`	✅	🔵 (ignored)
`destination-pubsub`	`0.2.0`	✅	✅
`destination-pulsar`	`0.1.3`	✅	✅
`destination-r2`	`0.1.0`	✅	✅
`destination-redis`	`0.1.4`	✅	✅
`destination-redpanda`	`0.1.0`	❌ (changelog missing)	✅
`destination-redshift`	`0.3.51`	✅	✅
`destination-rockset`	`0.1.4`	✅	✅
`destination-s3`	`0.3.17`	✅	✅
`destination-s3-glue`	`0.1.0`	✅	✅
`destination-scylla`	`0.1.3`	✅	✅
`destination-snowflake`	`0.4.40`	✅	✅
`destination-tidb`	`0.1.0`	✅	✅
`destination-yugabytedb`	`0.1.0`	✅	✅

See "Actionable Items" below for how to resolve warnings and errors.

✅ Other Modules (0)

Actionable Items

(click to expand)

Category	Status	Actionable Item
Version	❌ mismatch	The version of the connector is different from its normal variant. Please bump the version of the connector.
	⚠ doc not found	The connector does not seem to have a documentation file. This can be normal (e.g. basic connector like `source-jdbc` is not published or documented). Please double-check to make sure that it is not a bug.
Changelog	⚠ doc not found	The connector does not seem to have a documentation file. This can be normal (e.g. basic connector like `source-jdbc` is not published or documented). Please double-check to make sure that it is not a bug.
	❌ changelog missing	There is no chnagelog for the current version of the connector. If you are the author of the current version, please add a changelog.
Publish	⚠ not in seed	The connector is not in the seed file (e.g. `source_definitions.yaml`), so its publication status cannot be checked. This can be normal (e.g. some connectors are cloud-specific, and only listed in the cloud seed file). Please double-check to make sure that it is not a bug.
	❌ diff seed version	The connector exists in the seed file, but the latest version is not listed there. This usually means that the latest version is not published. Please use the `/publish` command to publish the latest version.

akashkulk

Is there a way you can diff this PR against the one you merged (and reverted) so it is easy to see the change? I assume it's basically the same except for the import

…rminate-connection-exeption-fix

…-handle-terminate-connection-exeption-fix' into omneshcheret/802-postgres-source-handle-terminate-connection-exeption-fix

sashaNeshcheret · 2022-11-30T19:27:14Z

Is there a way you can diff this PR against the one you merged (and reverted) so it is easy to see the change? I assume it's basically the same except for the import

I tried to create demo pr from current branch to previous that was failed for better visibility, but it has different history and a lot of changes(
But fix contains just two commits: commit1 and commit2.
All build tests, except 'Check test strictness' were successful, @akashkulk please review it.

akashkulk · 2022-11-30T19:32:35Z

...tegrations/bases/base-java/src/main/java/io/airbyte/integrations/base/IntegrationRunner.java

-import java.util.Optional;
-import java.util.Scanner;
-import java.util.Set;
+import java.util.*;


Can you only import what is required here?

sure, updated

…-handle-terminate-connection-exeption-fix' into omneshcheret/802-postgres-source-handle-terminate-connection-exeption-fix

akashkulk

LGTM - feel free to merge on green. Thanks!

akashkulk · 2022-12-02T21:19:49Z

/test connector=connectors/source-postgres

🕑 connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/3605170291
❌ connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/3605170291
🐛

Build Passed

Test summary info:

=========================== short test summary info ============================
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestConnection.test_check: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestDiscovery.test_discover: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestBasicRead.test_read: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestFullRefresh.test_sequential_reads: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestIncremental.test_two_sequential_reads: not found in the config.
================= 14 passed, 5 skipped, 21 warnings in 22.38s ==================

…rminate-connection-exeption-fix

…stgres-source-handle-terminate-connection-exeption-fix

sashaNeshcheret · 2022-12-05T13:13:09Z

/test connector=connectors/source-postgres

🕑 connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/3620372658
❌ connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/3620372658
🐛 https://gradle.com/s/nkeovkeqo7ju4

Build Failed

Test summary info:

Could not find result summary

…rminate-connection-exeption-fix

sashaNeshcheret · 2022-12-06T09:59:55Z

/test connector=connectors/source-postgres-strict-encrypt

🕑 connectors/source-postgres-strict-encrypt https://github.com/airbytehq/airbyte/actions/runs/3628445600
✅ connectors/source-postgres-strict-encrypt https://github.com/airbytehq/airbyte/actions/runs/3628445600
No Python unittests run

Build Passed

Test summary info:

All Passed

sashaNeshcheret · 2022-12-06T10:00:04Z

/test connector=connectors/source-postgres

🕑 connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/3628446682
✅ connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/3628446682
Python tests coverage:

	 Name                                                 Stmts   Miss  Cover   Missing
	 ----------------------------------------------------------------------------------
	 source_acceptance_test/base.py                          12      4    67%   16-19
	 source_acceptance_test/config.py                       140      5    96%   87, 93, 238, 242-243
	 source_acceptance_test/conftest.py                     199     93    53%   35, 41-43, 48, 53, 59, 65, 71, 77-79, 98, 103-105, 111-113, 119-120, 125-126, 131, 137, 146-155, 161-166, 181, 205, 236, 242, 250-255, 263-268, 276-289, 294-300, 307-318, 325-341
	 source_acceptance_test/plugin.py                        69     25    64%   22-23, 31, 36, 120-140, 144-148
	 source_acceptance_test/tests/test_core.py              398    111    72%   53, 58, 87-95, 100-107, 111-112, 116-117, 299, 337-354, 363-371, 375-380, 386, 419-424, 462-469, 512-514, 517, 582-590, 602-605, 610, 666-667, 673, 676, 712-722, 735-760
	 source_acceptance_test/tests/test_incremental.py       158     14    91%   52-59, 64-77, 240
	 source_acceptance_test/utils/asserts.py                 39      2    95%   62-63
	 source_acceptance_test/utils/common.py                  94     10    89%   16-17, 32-38, 72, 75
	 source_acceptance_test/utils/compare.py                 62     23    63%   21-51, 68, 97-99
	 source_acceptance_test/utils/connector_runner.py       112     50    55%   23-26, 32, 36, 39-68, 71-73, 76-78, 81-83, 86-88, 91-93, 96-114, 148-150
	 source_acceptance_test/utils/json_schema_helper.py     107     13    88%   30-31, 38, 41, 65-68, 96, 120, 192-194
	 ----------------------------------------------------------------------------------
	 TOTAL                                                 1569    350    78%

Build Passed

Test summary info:

=========================== short test summary info ============================
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestConnection.test_check: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestDiscovery.test_discover: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestBasicRead.test_read: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestFullRefresh.test_sequential_reads: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestIncremental.test_two_sequential_reads: not found in the config.
================= 14 passed, 5 skipped, 21 warnings in 22.17s ==================

…rminate-connection-exeption-fix

rodireich · 2022-12-06T20:09:10Z

/test connector=connectors/source-postgres

🕑 connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/3633076883
✅ connectors/source-postgres https://github.com/airbytehq/airbyte/actions/runs/3633076883
Python tests coverage:

	 Name                                                 Stmts   Miss  Cover   Missing
	 ----------------------------------------------------------------------------------
	 source_acceptance_test/base.py                          12      4    67%   16-19
	 source_acceptance_test/config.py                       140      5    96%   87, 93, 238, 242-243
	 source_acceptance_test/conftest.py                     208     92    56%   36, 42-44, 49, 54, 77, 83, 89-91, 110, 115-117, 123-125, 131-132, 137-138, 143, 149, 158-167, 173-178, 193, 217, 248, 254, 262-267, 275-280, 288-301, 306-312, 319-330, 337-353
	 source_acceptance_test/plugin.py                        69     25    64%   22-23, 31, 36, 120-140, 144-148
	 source_acceptance_test/tests/test_core.py              398    111    72%   53, 58, 87-95, 100-107, 111-112, 116-117, 299, 337-354, 363-371, 375-380, 386, 419-424, 462-469, 512-514, 517, 582-590, 602-605, 610, 666-667, 673, 676, 712-722, 735-760
	 source_acceptance_test/tests/test_incremental.py       158     14    91%   52-59, 64-77, 240
	 source_acceptance_test/utils/asserts.py                 39      2    95%   62-63
	 source_acceptance_test/utils/common.py                  94     10    89%   16-17, 32-38, 72, 75
	 source_acceptance_test/utils/compare.py                 62     23    63%   21-51, 68, 97-99
	 source_acceptance_test/utils/connector_runner.py       133     33    75%   24-27, 46-47, 50-54, 57-58, 73-75, 78-80, 83-85, 88-90, 93-95, 124-125, 159-161, 208
	 source_acceptance_test/utils/json_schema_helper.py     107     13    88%   30-31, 38, 41, 65-68, 96, 120, 192-194
	 ----------------------------------------------------------------------------------
	 TOTAL                                                 1599    332    79%

Build Passed

Test summary info:

=========================== short test summary info ============================
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestConnection.test_check: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestDiscovery.test_discover: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestBasicRead.test_read: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestFullRefresh.test_sequential_reads: not found in the config.
SKIPPED [1] ../usr/local/lib/python3.9/site-packages/source_acceptance_test/plugin.py:63: Skipping TestIncremental.test_two_sequential_reads: not found in the config.
================= 14 passed, 5 skipped, 21 warnings in 33.00s ==================

…rminate-connection-exeption-fix

sashaNeshcheret and others added 9 commits November 19, 2022 00:06

Source postgres: catch termination connection PSQLException

280c633

Source postgres: move common code to util method

e06a304

Source postgres: clean code

a36b3a0

Source postgres: review fixes and added unit tests

da3127f

Source postgres: clean code

f01acb9

Merge branch 'master' into omneshcheret/802-postgres-source-handle-te…

cf72f52

…rminate-connection-exeption

Source postgres: bump version

114d4aa

Source postgres: format

3214114

Source postgres: format

5fa6030

sashaNeshcheret requested a review from a team as a code owner November 29, 2022 17:53

octavia-squidington-iv added area/connectors Connector related issues area/documentation Improvements or additions to documentation connectors/source/postgres connectors/source/postgres-strict-encrypt labels Nov 29, 2022

Source postgres: bump version

dd9c22d

sashaNeshcheret temporarily deployed to more-secrets November 29, 2022 18:06 Inactive

akashkulk reviewed Nov 29, 2022

View reviewed changes

Merge branch 'master' into omneshcheret/802-postgres-source-handle-te…

36ea69d

…rminate-connection-exeption-fix

sashaNeshcheret temporarily deployed to more-secrets November 30, 2022 09:09 Inactive

Merge branch 'master' into omneshcheret/802-postgres-source-handle-te…

189af03

…rminate-connection-exeption-fix

VitaliiMaltsev temporarily deployed to more-secrets November 30, 2022 11:05 Inactive

sashaNeshcheret changed the title ~~Omneshcheret/802 postgres source handle terminate connection exeption fix~~ Postgres source: handle terminate connection exception with test. Nov 30, 2022

sashaNeshcheret added 2 commits November 30, 2022 19:22

Source postgres: fix failing test and bump version

9061da6

Merge remote-tracking branch 'origin/omneshcheret/802-postgres-source…

990521c

…-handle-terminate-connection-exeption-fix' into omneshcheret/802-postgres-source-handle-terminate-connection-exeption-fix

sashaNeshcheret temporarily deployed to more-secrets November 30, 2022 17:26 Inactive

sashaNeshcheret temporarily deployed to more-secrets November 30, 2022 19:10 Inactive

akashkulk reviewed Nov 30, 2022

View reviewed changes

sashaNeshcheret added 2 commits November 30, 2022 23:07

Source postgres: reformat import

1594eba

Merge remote-tracking branch 'origin/omneshcheret/802-postgres-source…

929c2e5

…-handle-terminate-connection-exeption-fix' into omneshcheret/802-postgres-source-handle-terminate-connection-exeption-fix

sashaNeshcheret temporarily deployed to more-secrets November 30, 2022 21:30 Inactive

akashkulk approved these changes Nov 30, 2022

View reviewed changes

Merge branch 'master' into omneshcheret/802-postgres-source-handle-te…

38b98a4

…rminate-connection-exeption-fix

octavia-squidington-iv removed the area/documentation Improvements or additions to documentation label Dec 2, 2022

akashkulk temporarily deployed to more-secrets December 2, 2022 21:24 Inactive

Merge remote-tracking branch 'origin/master' into omneshcheret/802-po…

81a6063

…stgres-source-handle-terminate-connection-exeption-fix

sashaNeshcheret temporarily deployed to more-secrets December 5, 2022 13:08 Inactive

sashaNeshcheret temporarily deployed to more-secrets December 5, 2022 13:09 Inactive

Merge branch 'master' into omneshcheret/802-postgres-source-handle-te…

166b1fa

…rminate-connection-exeption-fix

sashaNeshcheret temporarily deployed to more-secrets December 6, 2022 09:55 Inactive

Merge branch 'master' into omneshcheret/802-postgres-source-handle-te…

d4467c2

…rminate-connection-exeption-fix

rodireich temporarily deployed to more-secrets December 6, 2022 20:10 Inactive

Merge branch 'master' into omneshcheret/802-postgres-source-handle-te…

090b135

…rminate-connection-exeption-fix

sashaNeshcheret temporarily deployed to more-secrets December 6, 2022 20:54 Inactive

sashaNeshcheret merged commit 293075e into master Dec 6, 2022

sashaNeshcheret deleted the omneshcheret/802-postgres-source-handle-terminate-connection-exeption-fix branch December 6, 2022 21:11

octavia-squidington-iii mentioned this pull request Dec 7, 2022

Bump Airbyte version from 0.40.23 to 0.40.24 #20206

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Postgres source: handle terminate connection exception with test. #19887

Postgres source: handle terminate connection exception with test. #19887

sashaNeshcheret commented Nov 29, 2022

github-actions bot commented Nov 29, 2022 •

edited

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⚠ Sources (31)

❌ Destinations (46)

✅ Other Modules (0)

Actionable Items

akashkulk left a comment

sashaNeshcheret commented Nov 30, 2022

akashkulk Nov 30, 2022

sashaNeshcheret Nov 30, 2022

akashkulk left a comment

akashkulk commented Dec 2, 2022 •

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Postgres source: handle terminate connection exception with test. #19887

Postgres source: handle terminate connection exception with test. #19887

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sashaNeshcheret commented Nov 29, 2022

What

How

Recommended reading order

🚨 User Impact 🚨

Pre-merge Checklist

Community member or Airbyter

Airbyter

Community member or Airbyter

Airbyter

Tests

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Affected Connector Report

⚠ Sources (31)

❌ Destinations (46)

✅ Other Modules (0)

Actionable Items

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akashkulk commented Dec 2, 2022 • edited by github-actions bot Loading

Build Passed

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Build Failed

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