Update clockwork to v0.12.5 #51
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Most of the changes in clockwork do not seem to affect this workflow, other than updating the human part of the decontamination reference to CHM13. For example, clockwork now gracefully handles certain errors with cortex, but I'm already catching those errors in the WDL. |
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Tested and preliminarily passes on Terra. Releasing early so a collaborator can use it.