[CI] Fix typo in GitHub context variable in documentation deploy pipeline #1194
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NicolasGensollen
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Jul 11, 2024
…line (aramis-lab#1194) * fix typo in github context variable * split between test and doc runners for Linux
NicolasGensollen
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Jul 14, 2024
* [CI] Fix MacOS GitHub runner target (#1161) * [FIX] Fix wrong preprocessing sequence in adni-to-bids FDG PET Uniform (#1159) * Wrong Processed sequence --> Results: Impossible to make bids of FDG PET Uniform (does not find it) * Linter exception * Linter word-list exception update * Update clinica/iotools/converters/adni_to_bids/adni_modalities/adni_fdg_pet.py Co-authored-by: Gensollen <[email protected]> * Update pyproject.toml Co-authored-by: Gensollen <[email protected]> * Update clinica/iotools/converters/adni_to_bids/adni_modalities/adni_fdg_pet.py Co-authored-by: Gensollen <[email protected]> * Update clinica/iotools/converters/adni_to_bids/adni_modalities/adni_fdg_pet.py * try using a text file for ignoring words * remove useless codespell:ignore * sort ignore words --------- Co-authored-by: Gensollen <[email protected]> * [CI] Change unorganized folder for adni to bids tests (#1171) * [FIX] Fix calls to `matplotlib.cm.get_cmap` (#1185) * [CI] Use Github Actions to build and deploy documentation (#1191) * use github actions to build and deploy doc * print ref name * use pr number * remove Jenkins config * format variable properly * [CI] Fix deployed documentation folder names (#1192) * print ref name and head ref * test * [CI] Fix wrong folder name when deploying doc (#1193) * [CI] Fix typo in GitHub context variable in documentation deploy pipeline (#1194) * fix typo in github context variable * split between test and doc runners for Linux * [CI] Fix deploy step in documentation pipeline (#1201) * [TEST] Update test for habs-to-bids converter (#1202) * [TEST] Update test for aibl-to-bids converter (#1203) * [TEST] Update test for nifd-to-bids converter (#1205) * Bump tqdm from 4.66.1 to 4.66.3 (#1170) Bumps [tqdm](https://github.com/tqdm/tqdm) from 4.66.1 to 4.66.3. - [Release notes](https://github.com/tqdm/tqdm/releases) - [Commits](tqdm/tqdm@v4.66.1...v4.66.3) --- updated-dependencies: - dependency-name: tqdm dependency-type: indirect ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump jinja2 from 3.1.3 to 3.1.4 (#1173) Bumps [jinja2](https://github.com/pallets/jinja) from 3.1.3 to 3.1.4. - [Release notes](https://github.com/pallets/jinja/releases) - [Changelog](https://github.com/pallets/jinja/blob/main/CHANGES.rst) - [Commits](pallets/jinja@3.1.3...3.1.4) --- updated-dependencies: - dependency-name: jinja2 dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump requests from 2.31.0 to 2.32.0 (#1187) updated-dependencies: - dependency-name: requests dependency-type: indirect ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump urllib3 from 2.2.0 to 2.2.2 (#1210) Bumps [urllib3](https://github.com/urllib3/urllib3) from 2.2.0 to 2.2.2. - [Release notes](https://github.com/urllib3/urllib3/releases) - [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst) - [Commits](urllib3/urllib3@2.2.0...2.2.2) --- updated-dependencies: - dependency-name: urllib3 dependency-type: indirect ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump scikit-learn from 1.4.0 to 1.5.0 (#1211) Bumps [scikit-learn](https://github.com/scikit-learn/scikit-learn) from 1.4.0 to 1.5.0. - [Release notes](https://github.com/scikit-learn/scikit-learn/releases) - [Commits](scikit-learn/scikit-learn@1.4.0...1.5.0) --- updated-dependencies: - dependency-name: scikit-learn dependency-type: direct:production ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * [MAINT] Bump `requests` from `2.32.0` to `2.32.3` (#1216) * Bump certifi from 2024.2.2 to 2024.7.4 (#1222) Bumps [certifi](https://github.com/certifi/python-certifi) from 2024.2.2 to 2024.7.4. - [Commits](certifi/python-certifi@2024.02.02...2024.07.04) --- updated-dependencies: - dependency-name: certifi dependency-type: indirect ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump zipp from 3.17.0 to 3.19.1 (#1225) Bumps [zipp](https://github.com/jaraco/zipp) from 3.17.0 to 3.19.1. - [Release notes](https://github.com/jaraco/zipp/releases) - [Changelog](https://github.com/jaraco/zipp/blob/main/NEWS.rst) - [Commits](jaraco/zipp@v3.17.0...v3.19.1) --- updated-dependencies: - dependency-name: zipp dependency-type: indirect ... Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * [CI] Remove poetry install step from documentation pipeline (#1232) * bump poetry version to 1.8.3 * remove poetry install step --------- Signed-off-by: dependabot[bot] <[email protected]> Co-authored-by: HuguesRoy <[email protected]> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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