chore: improve docs and oracle development #534

RMCampos · 2023-10-02T21:06:44Z

Description

These changes mostly update readme files providing more accurate information. But also create a new service in the docker compose for Oracle API.

You can run oracle locally with:

docker compose --profile oracle up

Note you'll need VPN.

Type of change

New feature (non-breaking change which adds functionality)

How Has This Been Tested?

Tested locally;

Checklist

I have read the CONTRIBUTING doc
I have performed a self-review of my own code
I have commented my code, particularly in hard-to-understand areas
I have made corresponding changes to the documentation
My changes generate no new warnings
I have added tests that prove my fix is effective or that my feature works
New and existing unit tests pass locally with my changes
Any dependent changes have already been accepted and merged

Further comments

Thanks for the PR!

Any successful deployments (not always required) will be available below.
Backend
Frontend
Oracle-API

Once merged, code will be promoted and handed off to following workflow run.
Main Merge Workflow

No issue-related. This change updates the repo readme file which contains information of the existing services and applications.

No issue

docker-compose.yml

oracle-api/src/main/resources/application.properties

.gitignore

oracle-api/jssecacerts

* chore: improve docs and oracle development (#534) * docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]> * fix: wrong keycloak realm url for prod (#580) * fix: wrong keycloak realm url for prod issue #553 * ci: disable triggers temporarily * fix: spring pagination is zero-based (#584) * fix: spring pagination is zero-based issue #582 * fix: get triggers back wrongly merged in a previous pr * fix: default page index value for swagger when finding seedlots by user issue #582 * feat: backend and oracle decode fam cognito token issue #481 * [Snyk] Security upgrade axios from 1.4.0 to 1.6.0 (#592) * fix: frontend/package.json to reduce vulnerabilities The following vulnerabilities are fixed with an upgrade: - https://snyk.io/vuln/SNYK-JS-AXIOS-6032459 * package-lock.json --------- Co-authored-by: snyk-bot <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * Update babel deps for subdep vulterability (#599) * Bump vitest for subdep get-func-name vulerability (#601) * Use override to bring postcss up to patched ver (#606) * Feat/386 enable oracle api to send logs to opensearch (#436) * feat: creating and adjusting scripts * feat: creating new config files for fluentbit * feat: adjusting scripts * fix: fixing comment * fix: adjusting property * fix: fixing fluentbit deploy path on the workflows * feat: scape double quotes for file logging issue #386 * feat: update log patterns and logging levels issue #386 * ci: add opensearch oracle-api environment flag issue #386 * feat: add oracle-api config files for fluentbit issue #386 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Craig Yu <[email protected]> * feat: add user id provided by the idp and email * chore: remove comment with real name issue #481 * chore: remove comment with real information issue #481 * ci: add build arg for backend issue #481 * ci: add build arg for backend round 2 issue #481 * ci: add build arg for backend issue #481 * feat: add default aws cognito issuer uri issue #481 * ci: add missing env var to oracle api issue #481 * ci: fix env var for postgres and oracle issue #481

* Feat/480 replace keycloak by fam for authentication on fe (#578) * feat: replace keycloak by fam Issue #480 These changes are the first changes to get FAM working with SPAR since FAM is the preferred authentication library for the ministry applications. * feat: remove context not required anymore Issue #480 This change removes the Context Authentication file created when using keycloak, not needed anymore, because now there's an authentication service created that will handle everything. * feat: fam working locally in the front end Issue #480 This change updates files in the front end in order of getting it working with FAM and AWS Cognito authentication. Note that this is a working in progress, which means you may find some console log. * feat: disable authentication in the back end Issue #480 This commit update the back end service to remove all authentication and authorization handling for now, since it will be tackled in a future task issue #481. * fix: wrong docker compose yml identation Issue #480 Simply fix the docker-compose.yml file identation. * feat: disable backend security Issue #480 This change disables the security in the back end REST api and allows actuator endpoints to be accessed. * feat: add context provider for a better usage Issue #480 This change get back all context-related files and components to work closely with what we have for keycloak. * feat: create header between FE and BE Issue #480 A simple header was created to enable users to keep using SPAR client with usual activities until we get #481 finished. * test: fix user authentication helper test Issue #480 Fix tests and javadoc broken checkstyle. * test: split context and provider and fix land test Issue #480 Having context and provider splited into two files make it possible to mock values for testing components. * tests: get all tests passing related to auth Issue #480 Now all tests are working and passing. There's still issues related to favourite activities mock and morage js, though. * feat: remove old use auth hook created Issue #480 Remove use auth and replace it by use context with the authentication context name. * feat: add runtime hint for http servlet request Issue #480 Runtime Hints required for graal vm and cloud native. * chore: add javadoc comments Issue #480 * feat: add runtime hints for cloud native Issue #480 * ci: add new env vars to workflows Issue #480 Yep, just that. * feat: prevent access from missing env var Issue #480 * chore: fix warnings and issues raised by vscode Issue #480 * test: add user authentication test for temporary case * VITE_AWS_DOMAIN * VITE_AWS_DOMAIN try 2 * VITE_AWS_DOMAIN try 3 * chore: remove unused code issue #480 * chore: remove all keycloak related references issue #480 * chore: improve vite init global issue #480 * ci: crated docker compose test file and fix dockerfiles issue #480 * feat: improve login redirects for a better ux issue #480 * feat: add try catch on signout issue #480 * feat: remove await from logout * Test heap size builds * Dial down max-old-space-size * feat: add refresh token function issue #480 * feat: get cypress working with FAM issue #480 * chore: fix authentication issues on oracle-api * feat: improve authentication for business bce-id issue #480 * test: get cypress working with fam issue #480 * test: update cypress test workflow to use oracle dev issue #480 * chore: remove uneeded variable from landing page * fix: refactor routing, fix cypress, housekeeping * fix: remove code smells * fix: change sonar exclusion * feat: sign out feature redirect issue issue #480 * test: fix cypress test user name issue #480 * fix: remove try catch blocks * fix: remove role req --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * feat: replace jwt decode and roles to use fam authorization on be (#585) * chore: improve docs and oracle development (#534) * docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]> * fix: wrong keycloak realm url for prod (#580) * fix: wrong keycloak realm url for prod issue #553 * ci: disable triggers temporarily * fix: spring pagination is zero-based (#584) * fix: spring pagination is zero-based issue #582 * fix: get triggers back wrongly merged in a previous pr * fix: default page index value for swagger when finding seedlots by user issue #582 * feat: backend and oracle decode fam cognito token issue #481 * [Snyk] Security upgrade axios from 1.4.0 to 1.6.0 (#592) * fix: frontend/package.json to reduce vulnerabilities The following vulnerabilities are fixed with an upgrade: - https://snyk.io/vuln/SNYK-JS-AXIOS-6032459 * package-lock.json --------- Co-authored-by: snyk-bot <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * Update babel deps for subdep vulterability (#599) * Bump vitest for subdep get-func-name vulerability (#601) * Use override to bring postcss up to patched ver (#606) * Feat/386 enable oracle api to send logs to opensearch (#436) * feat: creating and adjusting scripts * feat: creating new config files for fluentbit * feat: adjusting scripts * fix: fixing comment * fix: adjusting property * fix: fixing fluentbit deploy path on the workflows * feat: scape double quotes for file logging issue #386 * feat: update log patterns and logging levels issue #386 * ci: add opensearch oracle-api environment flag issue #386 * feat: add oracle-api config files for fluentbit issue #386 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Craig Yu <[email protected]> * feat: add user id provided by the idp and email * chore: remove comment with real name issue #481 * chore: remove comment with real information issue #481 * ci: add build arg for backend issue #481 * ci: add build arg for backend round 2 issue #481 * ci: add build arg for backend issue #481 * feat: add default aws cognito issuer uri issue #481 * ci: add missing env var to oracle api issue #481 * ci: fix env var for postgres and oracle issue #481 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]>

* docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]>

* Feat/480 replace keycloak by fam for authentication on fe (#578) * feat: replace keycloak by fam Issue #480 These changes are the first changes to get FAM working with SPAR since FAM is the preferred authentication library for the ministry applications. * feat: remove context not required anymore Issue #480 This change removes the Context Authentication file created when using keycloak, not needed anymore, because now there's an authentication service created that will handle everything. * feat: fam working locally in the front end Issue #480 This change updates files in the front end in order of getting it working with FAM and AWS Cognito authentication. Note that this is a working in progress, which means you may find some console log. * feat: disable authentication in the back end Issue #480 This commit update the back end service to remove all authentication and authorization handling for now, since it will be tackled in a future task issue #481. * fix: wrong docker compose yml identation Issue #480 Simply fix the docker-compose.yml file identation. * feat: disable backend security Issue #480 This change disables the security in the back end REST api and allows actuator endpoints to be accessed. * feat: add context provider for a better usage Issue #480 This change get back all context-related files and components to work closely with what we have for keycloak. * feat: create header between FE and BE Issue #480 A simple header was created to enable users to keep using SPAR client with usual activities until we get #481 finished. * test: fix user authentication helper test Issue #480 Fix tests and javadoc broken checkstyle. * test: split context and provider and fix land test Issue #480 Having context and provider splited into two files make it possible to mock values for testing components. * tests: get all tests passing related to auth Issue #480 Now all tests are working and passing. There's still issues related to favourite activities mock and morage js, though. * feat: remove old use auth hook created Issue #480 Remove use auth and replace it by use context with the authentication context name. * feat: add runtime hint for http servlet request Issue #480 Runtime Hints required for graal vm and cloud native. * chore: add javadoc comments Issue #480 * feat: add runtime hints for cloud native Issue #480 * ci: add new env vars to workflows Issue #480 Yep, just that. * feat: prevent access from missing env var Issue #480 * chore: fix warnings and issues raised by vscode Issue #480 * test: add user authentication test for temporary case * VITE_AWS_DOMAIN * VITE_AWS_DOMAIN try 2 * VITE_AWS_DOMAIN try 3 * chore: remove unused code issue #480 * chore: remove all keycloak related references issue #480 * chore: improve vite init global issue #480 * ci: crated docker compose test file and fix dockerfiles issue #480 * feat: improve login redirects for a better ux issue #480 * feat: add try catch on signout issue #480 * feat: remove await from logout * Test heap size builds * Dial down max-old-space-size * feat: add refresh token function issue #480 * feat: get cypress working with FAM issue #480 * chore: fix authentication issues on oracle-api * feat: improve authentication for business bce-id issue #480 * test: get cypress working with fam issue #480 * test: update cypress test workflow to use oracle dev issue #480 * chore: remove uneeded variable from landing page * fix: refactor routing, fix cypress, housekeeping * fix: remove code smells * fix: change sonar exclusion * feat: sign out feature redirect issue issue #480 * test: fix cypress test user name issue #480 * fix: remove try catch blocks * fix: remove role req --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * feat: replace jwt decode and roles to use fam authorization on be (#585) * chore: improve docs and oracle development (#534) * docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]> * fix: wrong keycloak realm url for prod (#580) * fix: wrong keycloak realm url for prod issue #553 * ci: disable triggers temporarily * fix: spring pagination is zero-based (#584) * fix: spring pagination is zero-based issue #582 * fix: get triggers back wrongly merged in a previous pr * fix: default page index value for swagger when finding seedlots by user issue #582 * feat: backend and oracle decode fam cognito token issue #481 * [Snyk] Security upgrade axios from 1.4.0 to 1.6.0 (#592) * fix: frontend/package.json to reduce vulnerabilities The following vulnerabilities are fixed with an upgrade: - https://snyk.io/vuln/SNYK-JS-AXIOS-6032459 * package-lock.json --------- Co-authored-by: snyk-bot <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * Update babel deps for subdep vulterability (#599) * Bump vitest for subdep get-func-name vulerability (#601) * Use override to bring postcss up to patched ver (#606) * Feat/386 enable oracle api to send logs to opensearch (#436) * feat: creating and adjusting scripts * feat: creating new config files for fluentbit * feat: adjusting scripts * fix: fixing comment * fix: adjusting property * fix: fixing fluentbit deploy path on the workflows * feat: scape double quotes for file logging issue #386 * feat: update log patterns and logging levels issue #386 * ci: add opensearch oracle-api environment flag issue #386 * feat: add oracle-api config files for fluentbit issue #386 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Craig Yu <[email protected]> * feat: add user id provided by the idp and email * chore: remove comment with real name issue #481 * chore: remove comment with real information issue #481 * ci: add build arg for backend issue #481 * ci: add build arg for backend round 2 issue #481 * ci: add build arg for backend issue #481 * feat: add default aws cognito issuer uri issue #481 * ci: add missing env var to oracle api issue #481 * ci: fix env var for postgres and oracle issue #481 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]>

* docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]>

* Feat/480 replace keycloak by fam for authentication on fe (#578) * feat: replace keycloak by fam Issue #480 These changes are the first changes to get FAM working with SPAR since FAM is the preferred authentication library for the ministry applications. * feat: remove context not required anymore Issue #480 This change removes the Context Authentication file created when using keycloak, not needed anymore, because now there's an authentication service created that will handle everything. * feat: fam working locally in the front end Issue #480 This change updates files in the front end in order of getting it working with FAM and AWS Cognito authentication. Note that this is a working in progress, which means you may find some console log. * feat: disable authentication in the back end Issue #480 This commit update the back end service to remove all authentication and authorization handling for now, since it will be tackled in a future task issue #481. * fix: wrong docker compose yml identation Issue #480 Simply fix the docker-compose.yml file identation. * feat: disable backend security Issue #480 This change disables the security in the back end REST api and allows actuator endpoints to be accessed. * feat: add context provider for a better usage Issue #480 This change get back all context-related files and components to work closely with what we have for keycloak. * feat: create header between FE and BE Issue #480 A simple header was created to enable users to keep using SPAR client with usual activities until we get #481 finished. * test: fix user authentication helper test Issue #480 Fix tests and javadoc broken checkstyle. * test: split context and provider and fix land test Issue #480 Having context and provider splited into two files make it possible to mock values for testing components. * tests: get all tests passing related to auth Issue #480 Now all tests are working and passing. There's still issues related to favourite activities mock and morage js, though. * feat: remove old use auth hook created Issue #480 Remove use auth and replace it by use context with the authentication context name. * feat: add runtime hint for http servlet request Issue #480 Runtime Hints required for graal vm and cloud native. * chore: add javadoc comments Issue #480 * feat: add runtime hints for cloud native Issue #480 * ci: add new env vars to workflows Issue #480 Yep, just that. * feat: prevent access from missing env var Issue #480 * chore: fix warnings and issues raised by vscode Issue #480 * test: add user authentication test for temporary case * VITE_AWS_DOMAIN * VITE_AWS_DOMAIN try 2 * VITE_AWS_DOMAIN try 3 * chore: remove unused code issue #480 * chore: remove all keycloak related references issue #480 * chore: improve vite init global issue #480 * ci: crated docker compose test file and fix dockerfiles issue #480 * feat: improve login redirects for a better ux issue #480 * feat: add try catch on signout issue #480 * feat: remove await from logout * Test heap size builds * Dial down max-old-space-size * feat: add refresh token function issue #480 * feat: get cypress working with FAM issue #480 * chore: fix authentication issues on oracle-api * feat: improve authentication for business bce-id issue #480 * test: get cypress working with fam issue #480 * test: update cypress test workflow to use oracle dev issue #480 * chore: remove uneeded variable from landing page * fix: refactor routing, fix cypress, housekeeping * fix: remove code smells * fix: change sonar exclusion * feat: sign out feature redirect issue issue #480 * test: fix cypress test user name issue #480 * fix: remove try catch blocks * fix: remove role req --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * feat: replace jwt decode and roles to use fam authorization on be (#585) * chore: improve docs and oracle development (#534) * docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]> * fix: wrong keycloak realm url for prod (#580) * fix: wrong keycloak realm url for prod issue #553 * ci: disable triggers temporarily * fix: spring pagination is zero-based (#584) * fix: spring pagination is zero-based issue #582 * fix: get triggers back wrongly merged in a previous pr * fix: default page index value for swagger when finding seedlots by user issue #582 * feat: backend and oracle decode fam cognito token issue #481 * [Snyk] Security upgrade axios from 1.4.0 to 1.6.0 (#592) * fix: frontend/package.json to reduce vulnerabilities The following vulnerabilities are fixed with an upgrade: - https://snyk.io/vuln/SNYK-JS-AXIOS-6032459 * package-lock.json --------- Co-authored-by: snyk-bot <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * Update babel deps for subdep vulterability (#599) * Bump vitest for subdep get-func-name vulerability (#601) * Use override to bring postcss up to patched ver (#606) * Feat/386 enable oracle api to send logs to opensearch (#436) * feat: creating and adjusting scripts * feat: creating new config files for fluentbit * feat: adjusting scripts * fix: fixing comment * fix: adjusting property * fix: fixing fluentbit deploy path on the workflows * feat: scape double quotes for file logging issue #386 * feat: update log patterns and logging levels issue #386 * ci: add opensearch oracle-api environment flag issue #386 * feat: add oracle-api config files for fluentbit issue #386 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Craig Yu <[email protected]> * feat: add user id provided by the idp and email * chore: remove comment with real name issue #481 * chore: remove comment with real information issue #481 * ci: add build arg for backend issue #481 * ci: add build arg for backend round 2 issue #481 * ci: add build arg for backend issue #481 * feat: add default aws cognito issuer uri issue #481 * ci: add missing env var to oracle api issue #481 * ci: fix env var for postgres and oracle issue #481 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]>

* docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]>

* Feat/480 replace keycloak by fam for authentication on fe (#578) * feat: replace keycloak by fam Issue #480 These changes are the first changes to get FAM working with SPAR since FAM is the preferred authentication library for the ministry applications. * feat: remove context not required anymore Issue #480 This change removes the Context Authentication file created when using keycloak, not needed anymore, because now there's an authentication service created that will handle everything. * feat: fam working locally in the front end Issue #480 This change updates files in the front end in order of getting it working with FAM and AWS Cognito authentication. Note that this is a working in progress, which means you may find some console log. * feat: disable authentication in the back end Issue #480 This commit update the back end service to remove all authentication and authorization handling for now, since it will be tackled in a future task issue #481. * fix: wrong docker compose yml identation Issue #480 Simply fix the docker-compose.yml file identation. * feat: disable backend security Issue #480 This change disables the security in the back end REST api and allows actuator endpoints to be accessed. * feat: add context provider for a better usage Issue #480 This change get back all context-related files and components to work closely with what we have for keycloak. * feat: create header between FE and BE Issue #480 A simple header was created to enable users to keep using SPAR client with usual activities until we get #481 finished. * test: fix user authentication helper test Issue #480 Fix tests and javadoc broken checkstyle. * test: split context and provider and fix land test Issue #480 Having context and provider splited into two files make it possible to mock values for testing components. * tests: get all tests passing related to auth Issue #480 Now all tests are working and passing. There's still issues related to favourite activities mock and morage js, though. * feat: remove old use auth hook created Issue #480 Remove use auth and replace it by use context with the authentication context name. * feat: add runtime hint for http servlet request Issue #480 Runtime Hints required for graal vm and cloud native. * chore: add javadoc comments Issue #480 * feat: add runtime hints for cloud native Issue #480 * ci: add new env vars to workflows Issue #480 Yep, just that. * feat: prevent access from missing env var Issue #480 * chore: fix warnings and issues raised by vscode Issue #480 * test: add user authentication test for temporary case * VITE_AWS_DOMAIN * VITE_AWS_DOMAIN try 2 * VITE_AWS_DOMAIN try 3 * chore: remove unused code issue #480 * chore: remove all keycloak related references issue #480 * chore: improve vite init global issue #480 * ci: crated docker compose test file and fix dockerfiles issue #480 * feat: improve login redirects for a better ux issue #480 * feat: add try catch on signout issue #480 * feat: remove await from logout * Test heap size builds * Dial down max-old-space-size * feat: add refresh token function issue #480 * feat: get cypress working with FAM issue #480 * chore: fix authentication issues on oracle-api * feat: improve authentication for business bce-id issue #480 * test: get cypress working with fam issue #480 * test: update cypress test workflow to use oracle dev issue #480 * chore: remove uneeded variable from landing page * fix: refactor routing, fix cypress, housekeeping * fix: remove code smells * fix: change sonar exclusion * feat: sign out feature redirect issue issue #480 * test: fix cypress test user name issue #480 * fix: remove try catch blocks * fix: remove role req --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * feat: replace jwt decode and roles to use fam authorization on be (#585) * chore: improve docs and oracle development (#534) * docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]> * fix: wrong keycloak realm url for prod (#580) * fix: wrong keycloak realm url for prod issue #553 * ci: disable triggers temporarily * fix: spring pagination is zero-based (#584) * fix: spring pagination is zero-based issue #582 * fix: get triggers back wrongly merged in a previous pr * fix: default page index value for swagger when finding seedlots by user issue #582 * feat: backend and oracle decode fam cognito token issue #481 * [Snyk] Security upgrade axios from 1.4.0 to 1.6.0 (#592) * fix: frontend/package.json to reduce vulnerabilities The following vulnerabilities are fixed with an upgrade: - https://snyk.io/vuln/SNYK-JS-AXIOS-6032459 * package-lock.json --------- Co-authored-by: snyk-bot <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * Update babel deps for subdep vulterability (#599) * Bump vitest for subdep get-func-name vulerability (#601) * Use override to bring postcss up to patched ver (#606) * Feat/386 enable oracle api to send logs to opensearch (#436) * feat: creating and adjusting scripts * feat: creating new config files for fluentbit * feat: adjusting scripts * fix: fixing comment * fix: adjusting property * fix: fixing fluentbit deploy path on the workflows * feat: scape double quotes for file logging issue #386 * feat: update log patterns and logging levels issue #386 * ci: add opensearch oracle-api environment flag issue #386 * feat: add oracle-api config files for fluentbit issue #386 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Craig Yu <[email protected]> * feat: add user id provided by the idp and email * chore: remove comment with real name issue #481 * chore: remove comment with real information issue #481 * ci: add build arg for backend issue #481 * ci: add build arg for backend round 2 issue #481 * ci: add build arg for backend issue #481 * feat: add default aws cognito issuer uri issue #481 * ci: add missing env var to oracle api issue #481 * ci: fix env var for postgres and oracle issue #481 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]>

* docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]>

* Feat/480 replace keycloak by fam for authentication on fe (#578) * feat: replace keycloak by fam Issue #480 These changes are the first changes to get FAM working with SPAR since FAM is the preferred authentication library for the ministry applications. * feat: remove context not required anymore Issue #480 This change removes the Context Authentication file created when using keycloak, not needed anymore, because now there's an authentication service created that will handle everything. * feat: fam working locally in the front end Issue #480 This change updates files in the front end in order of getting it working with FAM and AWS Cognito authentication. Note that this is a working in progress, which means you may find some console log. * feat: disable authentication in the back end Issue #480 This commit update the back end service to remove all authentication and authorization handling for now, since it will be tackled in a future task issue #481. * fix: wrong docker compose yml identation Issue #480 Simply fix the docker-compose.yml file identation. * feat: disable backend security Issue #480 This change disables the security in the back end REST api and allows actuator endpoints to be accessed. * feat: add context provider for a better usage Issue #480 This change get back all context-related files and components to work closely with what we have for keycloak. * feat: create header between FE and BE Issue #480 A simple header was created to enable users to keep using SPAR client with usual activities until we get #481 finished. * test: fix user authentication helper test Issue #480 Fix tests and javadoc broken checkstyle. * test: split context and provider and fix land test Issue #480 Having context and provider splited into two files make it possible to mock values for testing components. * tests: get all tests passing related to auth Issue #480 Now all tests are working and passing. There's still issues related to favourite activities mock and morage js, though. * feat: remove old use auth hook created Issue #480 Remove use auth and replace it by use context with the authentication context name. * feat: add runtime hint for http servlet request Issue #480 Runtime Hints required for graal vm and cloud native. * chore: add javadoc comments Issue #480 * feat: add runtime hints for cloud native Issue #480 * ci: add new env vars to workflows Issue #480 Yep, just that. * feat: prevent access from missing env var Issue #480 * chore: fix warnings and issues raised by vscode Issue #480 * test: add user authentication test for temporary case * VITE_AWS_DOMAIN * VITE_AWS_DOMAIN try 2 * VITE_AWS_DOMAIN try 3 * chore: remove unused code issue #480 * chore: remove all keycloak related references issue #480 * chore: improve vite init global issue #480 * ci: crated docker compose test file and fix dockerfiles issue #480 * feat: improve login redirects for a better ux issue #480 * feat: add try catch on signout issue #480 * feat: remove await from logout * Test heap size builds * Dial down max-old-space-size * feat: add refresh token function issue #480 * feat: get cypress working with FAM issue #480 * chore: fix authentication issues on oracle-api * feat: improve authentication for business bce-id issue #480 * test: get cypress working with fam issue #480 * test: update cypress test workflow to use oracle dev issue #480 * chore: remove uneeded variable from landing page * fix: refactor routing, fix cypress, housekeeping * fix: remove code smells * fix: change sonar exclusion * feat: sign out feature redirect issue issue #480 * test: fix cypress test user name issue #480 * fix: remove try catch blocks * fix: remove role req --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * feat: replace jwt decode and roles to use fam authorization on be (#585) * chore: improve docs and oracle development (#534) * docs: update readme file with latest notes No issue-related. This change updates the repo readme file which contains information of the existing services and applications. * docs: improve documentation in general No issue * feat: allows oracle api to run and develop from docker No issue * test: vegetation code test improvements * chore: fix checkstyle * ci: add env var for oracle ca certs file * feat: remove jssecacerts file and add script for fetching it --------- Co-authored-by: Derek Roberts <[email protected]> * fix: wrong keycloak realm url for prod (#580) * fix: wrong keycloak realm url for prod issue #553 * ci: disable triggers temporarily * fix: spring pagination is zero-based (#584) * fix: spring pagination is zero-based issue #582 * fix: get triggers back wrongly merged in a previous pr * fix: default page index value for swagger when finding seedlots by user issue #582 * feat: backend and oracle decode fam cognito token issue #481 * [Snyk] Security upgrade axios from 1.4.0 to 1.6.0 (#592) * fix: frontend/package.json to reduce vulnerabilities The following vulnerabilities are fixed with an upgrade: - https://snyk.io/vuln/SNYK-JS-AXIOS-6032459 * package-lock.json --------- Co-authored-by: snyk-bot <[email protected]> Co-authored-by: Derek Roberts <[email protected]> * Update babel deps for subdep vulterability (#599) * Bump vitest for subdep get-func-name vulerability (#601) * Use override to bring postcss up to patched ver (#606) * Feat/386 enable oracle api to send logs to opensearch (#436) * feat: creating and adjusting scripts * feat: creating new config files for fluentbit * feat: adjusting scripts * fix: fixing comment * fix: adjusting property * fix: fixing fluentbit deploy path on the workflows * feat: scape double quotes for file logging issue #386 * feat: update log patterns and logging levels issue #386 * ci: add opensearch oracle-api environment flag issue #386 * feat: add oracle-api config files for fluentbit issue #386 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Craig Yu <[email protected]> * feat: add user id provided by the idp and email * chore: remove comment with real name issue #481 * chore: remove comment with real information issue #481 * ci: add build arg for backend issue #481 * ci: add build arg for backend round 2 issue #481 * ci: add build arg for backend issue #481 * feat: add default aws cognito issuer uri issue #481 * ci: add missing env var to oracle api issue #481 * ci: fix env var for postgres and oracle issue #481 --------- Co-authored-by: Ricardo Campos <[email protected]> Co-authored-by: Derek Roberts <[email protected]>

RMCampos added 4 commits September 20, 2023 18:33

docs: update readme file with latest notes

5f8111c

No issue-related. This change updates the repo readme file which contains information of the existing services and applications.

Merge branch 'main' into chore/update-readmes

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docs: improve documentation in general

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feat: allows oracle api to run and develop from docker

bcc6c70

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RMCampos self-assigned this Oct 2, 2023

RMCampos requested review from craigyu, mgaseta, DerekRoberts and SLDonnelly as code owners October 2, 2023 21:06

RMCampos commented Oct 2, 2023

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DerekRoberts approved these changes Oct 3, 2023

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craigyu reviewed Oct 3, 2023

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DerekRoberts marked this pull request as draft October 4, 2023 00:00

DerekRoberts and others added 3 commits October 3, 2023 17:01

Merge branch 'main' into chore/update-readmes

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Merge branch 'main' into chore/update-readmes

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Merge branch 'main' into chore/update-readmes

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RMCampos marked this pull request as ready for review October 24, 2023 12:38

craigyu reviewed Oct 24, 2023

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RMCampos added 3 commits October 24, 2023 14:30

test: vegetation code test improvements

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chore: fix checkstyle

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ci: add env var for oracle ca certs file

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RMCampos requested a review from craigyu October 24, 2023 18:26

RMCampos added 2 commits October 24, 2023 17:38

feat: remove jssecacerts file and add script for fetching it

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Merge branch 'main' into chore/update-readmes

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RMCampos merged commit 70a2839 into main Oct 26, 2023
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RMCampos deleted the chore/update-readmes branch October 26, 2023 14:38

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chore: improve docs and oracle development #534

chore: improve docs and oracle development #534

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chore: improve docs and oracle development #534

chore: improve docs and oracle development #534

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