ipykernel for JupyterLab app

easyconfigs/i/ipykernel/ipykernel-6.25.1-GCCcore-12.3.0.eb

@@ -0,0 +1,54 @@
+easyblock = 'PythonBundle'
+
+name = 'ipykernel'
+version = "6.25.1"
+
+homepage = 'https://ipykernel.readthedocs.io'
+description = """IPython Kernel for Jupyter."""
+
+toolchain = {'name': 'GCCcore', 'version': '12.3.0'}
+
+dependencies = [
+    ('Python', '3.11.3'),
+    ('hatchling', '1.18.0'),
+    ('IPython', '8.14.0'),
+    ('PyZMQ', '25.1.1'),
+    ('tornado', '6.3.2'),
+]
+
+sanity_pip_check = True
+use_pip = True
+
+exts_list = [
+    ('jupyter_core', '5.3.1', {
+        'patches': ['jupyter-core-5.3.1_fix_jupyter_path.patch'],
+        'checksums': [
+            {'jupyter_core-5.3.1.tar.gz': '5ba5c7938a7f97a6b0481463f7ff0dbac7c15ba48cf46fa4035ca6e838aa1aba'},
+            {'jupyter-core-5.3.1_fix_jupyter_path.patch':
+             '030f1beb91987eb7519360c6d0b5c999f8843f00bca6a170f9ea5d3667ee61e5'},
+        ],
+    }),
+    ('jupyter_client', '8.3.0', {
+        'checksums': ['3af69921fe99617be1670399a0b857ad67275eefcfa291e2c81a160b7b650f5f'],
+    }),
+    ('comm', '0.1.4', {
+        'checksums': ['354e40a59c9dd6db50c5cc6b4acc887d82e9603787f83b68c01a80a923984d15'],
+    }),
+    ('nest_asyncio', '1.5.7', {
+        'checksums': ['6a80f7b98f24d9083ed24608977c09dd608d83f91cccc24c9d2cba6d10e01c10'],
+    }),
+    ('%(name)s', '%(version)s', {
+        'checksums': ['050391364c0977e768e354bdb60cbbfbee7cbb943b1af1618382021136ffd42f'],
+    }),
+    ('debugpy', '1.6.7.post1', {
+        'source_tmpl': '%(name)s-%(version)s-py2.py3-none-any.whl',
+        'checksums': ['1093a5c541af079c13ac8c70ab8b24d1d35c8cacb676306cf11e57f699c02926'],
+    }),
+]
+
+sanity_check_paths = {
+    'files': ['lib/python%(pyshortver)s/site-packages/ipykernel_launcher.py'],
+    'dirs': ['lib/python%(pyshortver)s/site-packages/ipykernel'],
+}
+
+moduleclass = 'tools'

easyconfigs/i/ipykernel/jupyter-core-5.3.1_fix_jupyter_path.patch

@@ -0,0 +1,34 @@
+# Patch jupyter_core to help jupyter find the correct installation path.
+#
+# If jupyter is installed by EasyBuild, jupyter is not in the same place as python.
+# `EB_ENV_JUPYTER_ROOT` is used to indicate where jupyter are and should be set to
+# the instllation path in easyconfigs.
+# Avoid using `ENV_JUPYTER_PATH` and `ENV_CONFIG_PATH`. Otherwise user configuration
+# has lower priority and cannot save their own settings.
+# Author: Chia-Jung Hsu, 2024-01-31
+diff --git a/jupyter_core/paths.py b/jupyter_core/paths.py
+index a7bf051..b38589c 100644
+--- a/jupyter_core/paths.py
++++ b/jupyter_core/paths.py
+@@ -225,7 +225,10 @@ else:
+         ]
+
+ ENV_JUPYTER_PATH: List[str] = [os.path.join(sys.prefix, "share", "jupyter")]
+-
++if os.environ.get("EB_ENV_JUPYTER_ROOT"):
++    EB_ENV_JUPYTER_ROOT = [p.rstrip(os.sep) for p in os.environ["EB_ENV_JUPYTER_ROOT"].split(os.pathsep)]
++    ENV_JUPYTER_PATH = [str(Path(p, "share", "jupyter")) for p in EB_ENV_JUPYTER_ROOT]
++ 
+
+ def jupyter_path(*subdirs: str) -> List[str]:
+     """Return a list of directories to search for data files
+@@ -303,6 +306,9 @@ else:
+             "/etc/jupyter",
+         ]
+ ENV_CONFIG_PATH: List[str] = [os.path.join(sys.prefix, "etc", "jupyter")]
++if os.environ.get("EB_ENV_JUPYTER_ROOT"):
++    EB_ENV_JUPYTER_ROOT = [p.rstrip(os.sep) for p in os.environ["EB_ENV_JUPYTER_ROOT"].split(os.pathsep)]
++    ENV_CONFIG_PATH = [str(Path(p, "etc", "jupyter")) for p in EB_ENV_JUPYTER_ROOT]
+
+
+ def jupyter_config_path() -> List[str]: