Merge pull request #819 from sappelhoff/fix/datatypes/update

[MISC] update available datatypes in specification

README.md

@@ -16,8 +16,15 @@ In this repository, we develop the
 To organize your data in BIDS, all you need is neuro data, a computer, and the
 [BIDS specification](https://bids-specification.readthedocs.io/en/stable/).
 
-BIDS currently supports MRI, MEG, EEG, iEEG, behavioral, and physiological data
-and more modalities will be added.
+BIDS currently supports the following data modalities with more to come in the future:
+
+- MRI
+- MEG
+- EEG
+- iEEG
+- behavioral
+- physiological
+- PET
 
 # Formatting your data with BIDS
 

mkdocs.yml

@@ -1,4 +1,5 @@
 site_name: Brain Imaging Data Structure v1.6.1-dev
+site_url: https://bids-specification.readthedocs.io/en/stable/
 theme:
     name: material
     custom_dir: theme_customizations/

src/02-common-principles.md

@@ -37,15 +37,19 @@ misunderstanding we clarify them here.
     scanning sequence/protocol.
 
 1.  **Data type** - a functional group of different types of data.
-    BIDS defines eight data types:
-    `func` (task based and resting state functional MRI),
-    `dwi` (diffusion weighted imaging),
-    `fmap` (field inhomogeneity mapping data such as field maps),
-    `anat` (structural imaging such as T1, T2, PD, and so on),
-    `meg` (magnetoencephalography),
-    `eeg` (electroencephalography),
-    `ieeg` (intracranial electroencephalography),
-    `beh` (behavioral).
+    BIDS defines the following data types:
+
+    1.  `func` (task based and resting state functional MRI)
+    1.  `dwi` (diffusion weighted imaging)
+    1.  `fmap` (field inhomogeneity mapping data such as field maps)
+    1.  `anat` (structural imaging such as T1, T2, PD, and so on)
+    1.  `perf` (perfusion)
+    1.  `meg` (magnetoencephalography)
+    1.  `eeg` (electroencephalography)
+    1.  `ieeg` (intracranial electroencephalography)
+    1.  `beh` (behavioral)
+    1.  `pet` (positron emission tomography)
+
     Data files are contained in a directory named for the data type.
     In raw datasets, the data type directory is nested inside subject and
     (optionally) session directories.