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Permit AnalyticalApproach to be a string or list of strings.
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With example provided by Cyril Pernet.
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effigies committed Jan 31, 2020
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4 changes: 2 additions & 2 deletions src/04-modality-specific-files/08-genetic-descriptor.md
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Expand Up @@ -80,7 +80,7 @@ fields:
| Field name | Definition | Values |
| :----------------- | :-------------------------------------------------------------------------- | :--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| GeneticLevel | MANDATORY Describes the level of analysis | `Genetic`, `Genomic`, `Epigenomic`, `Transcriptomic`, `Metabolomic`, or `Proteomic` |
| AnalyticalApproach | OPTIONAL Methodology used to analyse the GeneticLevel | Value must be taken from [gapsolr][] under /Study/Molecular Data Type, for instance `SNP Genotypes (Array)` or `Methylation (CpG)` |
| AnalyticalApproach | OPTIONAL Methodology or methodologies used to analyse the GeneticLevel | String or list of strings. Each Value must be taken from [gapsolr][] under /Study/Molecular Data Type, for instance `SNP Genotypes (Array)` or `Methylation (CpG)` |
| SampleOrigin | MANDATORY Describes from which tissue the genetic information was extracted | `blood`, `saliva`, `brain`, `csf`, `breast milk`, `bile`, `amniotic fluid`, `other biospecimen` |
| TissueOrigin | OPTIONAL Describes the type of tissue analyzed for SampleOrigin `brain` | `gray matter`, `white matter`, `csf`, `meninges`, `macrovascular` or `microvascular` |
| BrainLocation | OPTIONAL Refers to the location in space of the TissueOrigin | `MNI coordinate` or a `label` taken from the [Allen Brain Atlas][allen] possibly `layer` to refer to layer-specific gene expression, which can also tie up with laminar fMRI |
Expand All @@ -91,7 +91,7 @@ fields:
```JSON
{
"GeneticLevel": "Genetic",
"AnalyticalApproach": "SNP Genotypes",
"AnalyticalApproach": ["Whole Genome Sequencing", "SNP/CNV Genotypes"],
"SampleOrigin": "brain",
"TissueOrigin": "gray matter",
"CellType": "neuron",
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