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[FIX] Change hipCT microscopy suffix to XPCT #1822

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Jun 20, 2024
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4 changes: 2 additions & 2 deletions src/modality-specific-files/microscopy.md
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ and a guide for using macros can be found at
https://github.com/bids-standard/bids-specification/blob/master/macros_doc.md
-->
{{ MACROS___make_filename_template("raw", datatypes=["micr"], suffixes=["TEM", "SEM", "uCT", "BF", "DF",
"PC", "DIC", "FLUO", "CONF", "PLI", "CARS", "2PE", "MPE", "SR", "NLO", "OCT", "SPIM", "hipCT"], n_dupes_to_combine=4) }}
"PC", "DIC", "FLUO", "CONF", "PLI", "CARS", "2PE", "MPE", "SR", "NLO", "OCT", "SPIM", "XPCT"], n_dupes_to_combine=4) }}

Microscopy data MUST be stored in the `micr` directory.

Expand Down Expand Up @@ -88,7 +88,7 @@ and a guide for using macros can be found at
"NLO",
"OCT",
"SPIM",
"hipCT",
"XPCT",
]
)
}}
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8 changes: 4 additions & 4 deletions src/schema/objects/suffixes.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -607,11 +607,11 @@ headshape:
description: |
The 3-D locations of points that describe the head shape and/or electrode
locations can be digitized and stored in separate files.
hipCT:
value: hipCT
display_name: HiP-CT
XPCT:
value: XPCT
display_name: X-ray Phase-Contrast Tomography
description: |
Hierarchical Phase-Contrast Tomography imaging data
X-ray phase-contrast tomography imaging data
ieeg:
value: ieeg
display_name: Intracranial Electroencephalography
Expand Down
2 changes: 1 addition & 1 deletion src/schema/rules/files/raw/micr.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@ microscopy:
- NLO
- OCT
- SPIM
- hipCT
- XPCT
extensions:
- .ome.tif
- .ome.btf
Expand Down