Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[FIX] Add deprecated anatomical MRI suffixes back into schema #725

Merged
merged 2 commits into from
Feb 10, 2021

Conversation

tsalo
Copy link
Member

@tsalo tsalo commented Feb 9, 2021

Closes None. Stems from bids-standard/bids-validator#1161 (comment) by @effigies.

Changes proposed:

  • Add deprecated T2star, PD, and FLASH suffixes back into the schema.
  • Rename suffix groups in anat.yml to match the variable names in the validator.

@tsalo tsalo added the schema Issues related to the YAML schema representation of the specification. Patch version release. label Feb 9, 2021
@effigies
Copy link
Collaborator

effigies commented Feb 9, 2021

Do these have an impact on rendering anywhere?

@tsalo
Copy link
Member Author

tsalo commented Feb 9, 2021

Other than the entity table, no they shouldn't. The filename patterns will just generalize any patterns with more than 4 (I think) suffixes to just suffix.

Copy link
Member

@sappelhoff sappelhoff left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

oh, good catch! Also, I like the new (more descriptive) names instead of "nth group"

@sappelhoff sappelhoff merged commit 60fe941 into bids-standard:master Feb 10, 2021
@sappelhoff
Copy link
Member

Thanks 👍

@sappelhoff sappelhoff changed the title FIX: Add deprecated anatomical MRI suffixes back into schema [FIX] Add deprecated anatomical MRI suffixes back into schema Feb 13, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
schema Issues related to the YAML schema representation of the specification. Patch version release.
Projects
Development

Successfully merging this pull request may close these issues.

3 participants