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Implement PP2 and BP1 VCEP rules #182

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merged 2 commits into from
Aug 28, 2024

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Issue:

Description:

  • Implemented and tested

@gromdimon gromdimon linked an issue Aug 28, 2024 that may be closed by this pull request
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codecov bot commented Aug 28, 2024

Codecov Report

Attention: Patch coverage is 92.45283% with 12 lines in your changes missing coverage. Please review.

Project coverage is 86.32%. Comparing base (e371aea) to head (ec56f9b).
Report is 1 commits behind head on main.

Files Patch % Lines
src/vcep/hbopc.py 9.09% 10 Missing ⚠️
src/vcep/insight_colorectal_cancer.py 87.50% 2 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #182      +/-   ##
==========================================
+ Coverage   86.06%   86.32%   +0.26%     
==========================================
  Files          63       63              
  Lines        3689     3847     +158     
==========================================
+ Hits         3175     3321     +146     
- Misses        514      526      +12     
Files Coverage Δ
src/vcep/acadvl.py 100.00% <100.00%> (ø)
src/vcep/brain_malformations.py 100.00% <100.00%> (ø)
src/vcep/cardiomyopathy.py 100.00% <100.00%> (ø)
src/vcep/cdh1.py 100.00% <100.00%> (ø)
src/vcep/cerebral_creatine_deficiency_syndromes.py 100.00% <100.00%> (ø)
src/vcep/coagulation_factor_deficiency.py 98.00% <100.00%> (+0.08%) ⬆️
src/vcep/congenital_myopathies.py 100.00% <100.00%> (ø)
src/vcep/dicer1.py 100.00% <100.00%> (ø)
src/vcep/enigma.py 100.00% <100.00%> (ø)
src/vcep/epilepsy_sodium_channel.py 100.00% <100.00%> (ø)
... and 24 more

@gromdimon gromdimon merged commit 12f6e41 into main Aug 28, 2024
5 checks passed
@gromdimon gromdimon deleted the 175-implement-pp2-and-bp1-vcep-rules branch August 28, 2024 14:15
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Implement PP2 and BP1 VCEP rules
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