Implement full gene deletion method

[gromdimon]

Issue:

• Closes Implement _full_gene_deletionmethod #45

Description:

• Added StrucVar back to AutoACMG
• Fixed the unit-tests
• Added new structure for StrucVars prediction
• Added new unit-tests
• Implemented full_gene_deletion method

[codecov]

Codecov Report

Attention: Patch coverage is 78.51562% with 110 lines in your changes missing coverage. Please review.

Project coverage is 84.29%. Comparing base (59c9eb1) to head (a740471).
Report is 1 commits behind head on main.

Files with missing lines	Patch %	Lines
src/strucvar/auto_pvs1.py	55.73%	54 Missing ⚠️
src/auto_acmg.py	51.13%	43 Missing ⚠️
src/seqvar/auto_pvs1.py	35.29%	11 Missing ⚠️
src/defs/seqvar.py	75.00%	1 Missing ⚠️
src/defs/strucvar.py	95.23%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #188      +/-   ##
==========================================
- Coverage   84.86%   84.29%   -0.57%     
==========================================
  Files          63       65       +2     
  Lines        4467     4662     +195     
==========================================
+ Hits         3791     3930     +139     
- Misses        676      732      +56     

Files with missing lines	Coverage Δ
src/defs/auto_acmg.py	99.62% <100.00%> (+0.02%)	⬆️
src/seqvar/auto_bp7.py	97.43% <100.00%> (ø)
src/seqvar/auto_pm1.py	87.25% <100.00%> (ø)
src/seqvar/auto_pm2_ba1_bs1_bs2.py	41.57% <100.00%> (ø)
src/seqvar/auto_pm4_bp3.py	97.84% <100.00%> (ø)
src/seqvar/auto_pp2_bp1.py	66.21% <100.00%> (ø)
src/seqvar/auto_pp3_bp4.py	94.68% <100.00%> (ø)
src/seqvar/auto_ps1_pm5.py	92.55% <100.00%> (ø)
src/seqvar/default_predictor.py	100.00% <100.00%> (ø)
src/strucvar/default_predictor.py	100.00% <100.00%> (ø)
... and 39 more