feat: Migrate to Typer for CLI

[gromdimon]

Issue:

• Closes Enhance main script #9

Description:

• MIgrated to typer

[codecov]

Codecov Report

Attention: Patch coverage is 65.21739% with 16 lines in your changes are missing coverage. Please review.

Project coverage is 65.69%. Comparing base (3b38cda) to head (b92b934).

Additional details and impacted files

@@             Coverage Diff             @@
##             main      #22       +/-   ##
===========================================
+ Coverage   53.61%   65.69%   +12.08%     
===========================================
  Files          14       15        +1     
  Lines         871      860       -11     
===========================================
+ Hits          467      565       +98     
+ Misses        404      295      -109     

Files	Coverage Δ
src/api/annonars.py	90.00% <100.00%> (ø)
src/api/dotty.py	90.00% <100.00%> (ø)
src/api/mehari.py	65.62% <100.00%> (ø)
src/types/annonars.py	100.00% <ø> (ø)
src/types/autopvs1.py	100.00% <100.00%> (ø)
src/types/dotty.py	100.00% <ø> (ø)
src/types/enums.py	100.00% <ø> (ø)
src/types/mehari.py	100.00% <ø> (ø)
src/cli.py	95.00% <95.00%> (ø)
src/seqvar_pvs1.py	19.17% <50.00%> (+19.17%)	⬆️
... and 1 more

... and 1 file with indirect coverage changes