parsnp: add aarch64/arm64 builds

Signed-off-by: Martin Tzvetanov Grigorov <[email protected]>
bioconda · Oct 1, 2024 · b7c9d65 · b7c9d65
1 parent 8fc154f
commit b7c9d65
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Showing 2 changed files with 12 additions and 5 deletions.
diff --git a/recipes/parsnp/build.sh b/recipes/parsnp/build.sh
@@ -1,5 +1,7 @@
 #!/bin/bash
 
+set -xe
+
 mkdir -p  "$PREFIX/bin"
 mkdir -p  "$PREFIX/bin/bin"
 
@@ -13,7 +15,7 @@ else
     sed -i '/bin_PROGRAMS/d' ./libMUSCLE/Makefile.am
     ./configure --prefix=$PREFIX CXXFLAGS='-fopenmp'
 fi
-make -j
+make -j ${CPU_COUNT}
 make install
 
 cd ..
@@ -24,7 +26,7 @@ cd ..
 
 ./autogen.sh
 ./configure --with-libmuscle=$PREFIX/include
-make LDADD="$LDADD -lMUSCLE-3.7"
+make -j ${CPU_COUNT} LDADD="$LDADD -lMUSCLE-3.7"
 make install
 
 rm -R muscle/libMUSCLE

diff --git a/recipes/parsnp/meta.yaml b/recipes/parsnp/meta.yaml
@@ -9,7 +9,7 @@ source:
   sha256: cde5fb488418764e87942afa747002d01d35e80d7c3a44a71bb2d1bd4d69ed0c
 
 build:
-  number: 0
+  number: 1
   run_exports:
     - {{ pin_subpackage('parsnp', max_pin="x") }}
 
@@ -23,11 +23,11 @@ requirements:
   host:
     - zlib
     - llvm-openmp  # [osx]
-    - openmp  # [linux]
+    - libgomp  # [linux]
   run:
     - python >=3.7
     - llvm-openmp  # [osx]
-    - openmp  # [linux]
+    - libgomp  # [linux]
     - biopython
     - numpy
     - zlib
@@ -46,3 +46,8 @@ about:
   summary: Parsnp is a command-line-tool for efficient microbial core genome alignment and SNP detection.
   doc_url: "https://harvest.readthedocs.io/en/latest/content/parsnp/tutorial.html"
   dev_url: https://github.com/marbl/parsnp
+
+extra:
+  additional-platforms:
+    - linux-aarch64
+    - osx-arm64