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illumina-interop: enable Python bindings; add license. #40431

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illumina-interop: enable Python bindings; add license. #40431

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15cf5e0
Enable Python bindings; add license.
cbrueffer Apr 13, 2023
51bcfa5
WIP: Require Python for tests
cbrueffer Mar 20, 2024
7654f03
Add more requirements
cbrueffer Mar 20, 2024
116611a
More depends fixes
cbrueffer Mar 20, 2024
f231b06
More depends
cbrueffer Mar 20, 2024
6caf8ca
Debug
cbrueffer Mar 20, 2024
fdcbd15
debug
cbrueffer Mar 20, 2024
31c165b
debug
cbrueffer Mar 20, 2024
7bebd3f
debug
cbrueffer Mar 21, 2024
e81a8ec
debug
cbrueffer Mar 21, 2024
9bd4e8f
Merge branch 'master' into interop-python
martin-g Jul 1, 2024
2f1e841
Bump build number
martin-g Jul 1, 2024
351aad4
List the files of the installed Python version
martin-g Jul 1, 2024
47237af
List the contents of /opt/mambaforge/envs/bioconda/lib/python3*/
martin-g Jul 1, 2024
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13 changes: 12 additions & 1 deletion recipes/illumina-interop/meta.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ package:
version: '{{version}}'

build:
number: 1
number: 2
skip: true # [osx]
run_exports:
- {{ pin_subpackage('illumina-interop', max_pin="x.x") }}
Expand All @@ -21,9 +21,19 @@ requirements:
- cmake
- {{ compiler('c') }}
- {{ compiler('cxx') }}
- python >=3.9
- numpy
- swig
- libgomp # [linux]

test:
requires:
- python >=3.9
- numpy
commands:
- 'ls -Ra $CONDA_PREFIX/lib/'
- 'ls -Ra /opt/mambaforge/envs/bioconda/lib/python3*'
- 'ls -Ra /opt/mambaforge/envs/bioconda/lib/python3*/site-packages'
- interop_dumptext | grep Version > /dev/null
- interop_imaging_table | grep Version > /dev/null
- interop_summary | grep Version > /dev/null
Expand All @@ -47,6 +57,7 @@ about:
faster display of a subset of the original data (collapsed quality scores).
dev_url: https://github.com/Illumina/interop
license_family: GPL
license_file: LICENSE

extra:
additional-platforms:
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