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Patch repodata to relax HTSlib dependency upper bounds #42895

Merged
merged 2 commits into from
Sep 12, 2023
Merged

Patch repodata to relax HTSlib dependency upper bounds #42895

merged 2 commits into from
Sep 12, 2023

Commits on Sep 7, 2023

  1. Patch repodata to relax HTSlib dependency upper bounds 

    Upstream HTSlib is careful to maintain binary compatibility between
soversion bumps. Note though that those bumps are not correlated
with e.g. major version number bumps, as that would reflect a break
in source compatibility not binary compatibility.

Hence building other bioconda packages that use htslib produces a tight
bound on a single x.x htslib version, but we can use repodata patching
to widen the bounds on previously build packages, due to this forward
compatibility. Doing so will mean bioconda no longer needs to pin HTSlib,
as it will be less vital to ensure all dependent packages are built
against the exact same version of htslib. In turn, this will simplify
packaging htslib/samtools/bcftools updates.
    @jmarshall
    jmarshall committed Sep 7, 2023
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  2. ¯\_(ツ)_/¯

    @jmarshall
    jmarshall committed Sep 7, 2023
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