update the HSDecipher description #51020
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🧹 Outside diff range and nitpick comments (1)
recipes/hsdecipher/meta.yaml (1)
31-31: Excellent addition of a detailed description.The new description provides valuable information about HSDecipher's purpose and functionality, which aligns well with the PR objectives.
Consider breaking the description into multiple lines for improved readability in the YAML file. For example:
description: | Many tools have been developed to measure the degree of similarity between gene duplicates within and between species. Here, we present HSDecipher, a bioinformatics pipeline to assist users in the analysis and visualization of highly similar duplicate genes (HSDs). We describe the steps for analysis of HSDs statistics, expanding HSD gene set, and visualizing the results of comparative genomic analyses. HSDecipher represents a useful tool for researchers exploring the evolution of duplicate genes in select eukaryotic species.This multi-line format is more maintainable and easier to read in the source file.
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recipes/hsdecipher/meta.yaml (2)
27-27: Verify the change in the test command.The test command has been updated from
hsd_heatmap -htohsdecipher -h. This change suggests a modification in the main command-line interface of the tool.Please confirm:
- Is this change intentional?
- Does it maintain backward compatibility?
- Has the documentation been updated to reflect this change?
If this is a breaking change, consider adding a note in the package description or README to inform users about the new command.
Line range hint
1-38: Verify version number and build settings.Observations on the package metadata:
- The package version is set to 1.0.0, which suggests a significant update or first stable release.
- The build number is correctly set to 0 for a new version.
- The package is set as
noarch: python, which is appropriate for pure Python packages.- The minimum Python version is set to 3.7.
Please confirm:
- Is 1.0.0 the correct version number for this update?
- Are there any changes in the package that would require architecture-specific builds (if so,
noarch: pythonshould be removed)?- Is Python 3.7 still the minimum supported version?
These settings look good, but it's important to ensure they accurately reflect the current state and requirements of the package.
Describe your pull request here
update the HSDecipher description
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hsdecipher -h.