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Update tbtamr to 1.0.2 #51119

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merged 3 commits into from
Oct 3, 2024
Merged

Update tbtamr to 1.0.2 #51119

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5238e2b
Update tbtamr to 1.0.1
BiocondaBot Oct 3, 2024
d174c50
Update tbtamr to 1.0.2
BiocondaBot Oct 3, 2024
a1b6f17
add tabulate
mencian Oct 3, 2024
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22 changes: 13 additions & 9 deletions recipes/tbtamr/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{% set name = "tbtamr" %}
{% set version = "0.0.4" %}
{% set sha256 = "72db1eb835574f02b0d7768e6b04e310bd2229d0f684100004b20a133eecd882" %}
{% set version = "1.0.2" %}
{% set sha256 = "3b1e669a015ed7bb40977c104ae22f3a4e1e49f07c84b7043f0e6b21c8a0957a" %}

package:
name: "{{ name }}"
Expand All @@ -12,22 +12,20 @@ source:

build:
noarch: python
number: 1
number: 0
entry_points:
- tbtamr=tbtamr.tbtamr:main
run_exports:
- {{ pin_subpackage('tbtamr', max_pin="x.x") }}
script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vv "
script: "{{ PYTHON }} -m pip install . --no-deps --no-build-isolation --no-cache-dir -vvv"

requirements:
host:
- python >=3.8
- python >=3.10
- pip
run:
- python >=3.8
- psutil
- python >=3.10
- pandas
- csvtk
- bwa
- samtools =1.12
- snpeff =5.0
Expand All @@ -39,7 +37,12 @@ requirements:
- xlsxwriter
- requests
- tqdm

- joblib
- pydantic
- pytest
- tabulate
- unidecode
- pysam

test:
imports:
Expand All @@ -53,6 +56,7 @@ about:
license_file: LICENSE
license_family: "GPL3"
summary: "A tool implementing TB-Profiler for reporting of genomic DST for M. tuberculosis in a CPHL"
dev_url: "https://github.com/MDU-PHL/tbtamr"

extra:
recipe-maintainers:
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