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Minor text corrections Deploy static content to Pages #28: Commit 529825b pushed by huddlej
July 30, 2024 23:06 40s master
master
July 30, 2024 23:06 40s
Merge pull request #120 from blab/update-coronavirus-like-simulation-… Deploy static content to Pages #27: Commit beea366 pushed by huddlej
July 30, 2024 22:28 33s master
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July 30, 2024 22:28 33s
Merge pull request #117 from blab/text-edits Deploy static content to Pages #26: Commit b51dbd9 pushed by huddlej
July 24, 2024 22:21 39s master
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July 24, 2024 22:21 39s
Merge pull request #116 from blab/rerun-pca Deploy static content to Pages #25: Commit 524fa54 pushed by huddlej
July 19, 2024 00:15 33s master
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July 19, 2024 00:15 33s
Install C compiler needed by TreeKnit docker #3: Commit 3537c12 pushed by huddlej
July 11, 2024 02:40 10m 7s master
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July 11, 2024 02:40 10m 7s
Install C compiler needed by TreeKnit Deploy static content to Pages #24: Commit 3537c12 pushed by huddlej
July 11, 2024 02:40 34s master
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July 11, 2024 02:40 34s
Add Julia and TreeKnit to Docker image docker #2: Commit 9649e0b pushed by huddlej
July 11, 2024 02:31 3m 5s master
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July 11, 2024 02:31 3m 5s
Add Julia and TreeKnit to Docker image Deploy static content to Pages #23: Commit 9649e0b pushed by huddlej
July 11, 2024 02:31 39s master
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July 11, 2024 02:31 39s
Try simplifying Docker image builds Deploy static content to Pages #22: Commit 0ee8fb0 pushed by huddlej
July 11, 2024 01:23 39s master
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July 11, 2024 01:23 39s
Try simplifying Docker image builds docker #1: Commit 0ee8fb0 pushed by huddlej
July 11, 2024 01:23 1m 45s master
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July 11, 2024 01:23 1m 45s
Add DOI for supplementary data on Zenodo Deploy static content to Pages #21: Commit 8654f84 pushed by huddlej
May 3, 2024 21:51 35s master
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May 3, 2024 21:51 35s
Add example embeddings for recombinant lineages Deploy static content to Pages #20: Commit 2ee1286 pushed by huddlej
May 3, 2024 19:04 41s master
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May 3, 2024 19:04 41s
Update cover letter Deploy static content to Pages #19: Commit e60eef8 pushed by huddlej
May 3, 2024 00:01 43s master
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May 3, 2024 00:01 43s
Migrate manuscript to OUP LaTeX template Deploy static content to Pages #18: Commit c277c02 pushed by huddlej
May 2, 2024 23:47 34s master
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May 2, 2024 23:47 34s
Add supplemental plots of counts per t-SNE cluster Deploy static content to Pages #17: Commit b8886bd pushed by huddlej
April 26, 2024 22:55 35s master
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April 26, 2024 22:55 35s
Add bubble plots of recombinant lineages vs. t-SNE clusters Deploy static content to Pages #16: Commit b58e1c4 pushed by huddlej
April 26, 2024 22:19 38s master
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April 26, 2024 22:19 38s
Plot counts per recombinant lineage/t-SNE cluster Deploy static content to Pages #15: Commit 5d438e3 pushed by huddlej
April 26, 2024 22:07 42s master
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April 26, 2024 22:07 42s
Add bubble plot of MCCs vs. HA/NA t-SNE clusters Deploy static content to Pages #14: Commit 43916cd pushed by huddlej
April 26, 2024 20:53 36s master
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April 26, 2024 20:53 36s
Plot counts per MCC/t-SNE cluster pair for HA/NA Deploy static content to Pages #13: Commit 91253db pushed by huddlej
April 26, 2024 20:38 38s master
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April 26, 2024 20:38 38s
Replot Euclidean vs genetic distance with matplotlib boxplots Deploy static content to Pages #12: Commit 6a4a46f pushed by huddlej
April 26, 2024 18:50 40s master
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April 26, 2024 18:50 40s
Replace seaborn boxplot with matplotlib Deploy static content to Pages #11: Commit 894aea2 pushed by huddlej
April 26, 2024 18:11 46s master
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April 26, 2024 18:11 46s
Note that future work should try neural networks Deploy static content to Pages #10: Commit 5349cc5 pushed by huddlej
April 25, 2024 23:48 37s master
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April 25, 2024 23:48 37s
Clarify interpretability of results Deploy static content to Pages #9: Commit 0d63aad pushed by huddlej
April 25, 2024 23:17 40s master
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April 25, 2024 23:17 40s
Note computational complexity of MDS and t-SNE Deploy static content to Pages #8: Commit 842f9ee pushed by huddlej
April 18, 2024 23:46 33s master
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April 18, 2024 23:46 33s
Add subsections to discussion Deploy static content to Pages #7: Commit 8046f3e pushed by huddlej
April 18, 2024 20:25 35s master
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April 18, 2024 20:25 35s