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Merge pull request #131 from blab/increase-figure-resolution Deploy static content to Pages #53: Commit 6b2d2a0 pushed by huddlej
October 7, 2024 16:44 49s master
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October 7, 2024 16:44 49s
Update Zenodo URLs Deploy static content to Pages #52: Commit e73dcb9 pushed by huddlej
October 1, 2024 03:22 46s master
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October 1, 2024 03:22 46s
Merge pull request #129 from blab/minor-revisions Deploy static content to Pages #51: Commit 0883894 pushed by huddlej
September 27, 2024 07:00 44s master
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September 27, 2024 07:00 44s
Add link to seasonal flu builds w/ t-SNE clusters Deploy static content to Pages #50: Commit af8d222 pushed by huddlej
August 28, 2024 22:13 34s master
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August 28, 2024 22:13 34s
Update supplemental table captions in README Deploy static content to Pages #49: Commit 1fb2b64 pushed by huddlej
August 28, 2024 15:13 41s master
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August 28, 2024 15:13 41s
Finish updating supp figs in README Deploy static content to Pages #48: Commit 559c690 pushed by huddlej
August 28, 2024 14:46 39s master
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August 28, 2024 14:46 39s
Update abstract, fig captions, and some supp figs Deploy static content to Pages #47: Commit 7a42428 pushed by huddlej
August 28, 2024 13:27 49s master
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August 28, 2024 13:27 49s
Minor text edits caught on outloud read through Deploy static content to Pages #46: Commit 4d71090 pushed by huddlej
August 27, 2024 23:16 36s master
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August 27, 2024 23:16 36s
Update URLs for supplemental materials Deploy static content to Pages #45: Commit 504b49b pushed by huddlej
August 27, 2024 21:37 42s master
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August 27, 2024 21:37 42s
Add missing S prefixes to fig references Deploy static content to Pages #44: Commit 8fd2240 pushed by huddlej
August 26, 2024 22:37 37s master
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August 26, 2024 22:37 37s
Small text edit Deploy static content to Pages #43: Commit 82cba73 pushed by huddlej
August 23, 2024 23:40 36s master
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August 23, 2024 23:40 36s
Merge pull request #125 from blab/use-pathogen-cluster-mutations-command Deploy static content to Pages #42: Commit 285ca77 pushed by huddlej
August 23, 2024 19:24 37s master
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August 23, 2024 19:24 37s
Merge pull request #126 from blab/clarify-robustness Deploy static content to Pages #41: Commit d640ca3 pushed by huddlej
August 22, 2024 23:28 36s master
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August 22, 2024 23:28 36s
Add supplemental tanglegram for HA/NA analysis Deploy static content to Pages #40: Commit 717deb1 pushed by huddlej
August 20, 2024 18:12 32s master
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August 20, 2024 18:12 32s
Add same MCC color scale for Auspice as plots Deploy static content to Pages #39: Commit 1d0d1b3 pushed by huddlej
August 19, 2024 22:50 38s master
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August 19, 2024 22:50 38s
Clarify discussion of "recombinant" samples Deploy static content to Pages #38: Commit 63f6779 pushed by huddlej
August 19, 2024 21:59 30s master
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August 19, 2024 21:59 30s
Merge pull request #124 from blab/refine-figure-aesthetics Deploy static content to Pages #37: Commit afd1574 pushed by huddlej
August 19, 2024 19:52 33s master
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August 19, 2024 19:52 33s
Merge pull request #123 from blab/cluster-within-sc2-clade Deploy static content to Pages #36: Commit 04b9eab pushed by huddlej
August 14, 2024 21:57 39s master
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August 14, 2024 21:57 39s
Clarify the common coding of PCA inputs Deploy static content to Pages #35: Commit 5588f10 pushed by huddlej
August 13, 2024 22:10 35s master
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August 13, 2024 22:10 35s
Clarify the source of outliers Deploy static content to Pages #34: Commit 8502a44 pushed by huddlej
August 12, 2024 21:44 45s master
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August 12, 2024 21:44 45s
Relabel representative MDS colors with early/late labels Deploy static content to Pages #33: Commit 9fab69e pushed by huddlej
August 12, 2024 20:50 39s master
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August 12, 2024 20:50 39s
Clarify why we omitted the root MCC Deploy static content to Pages #32: Commit 83de3ba pushed by huddlej
August 12, 2024 20:44 40s master
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August 12, 2024 20:44 40s
Refine and document Snakemake profiles Deploy static content to Pages #31: Commit c191ba8 pushed by huddlej
August 9, 2024 21:34 37s master
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August 9, 2024 21:34 37s
Merge pull request #119 from blab/cluster-by-distances Deploy static content to Pages #30: Commit d12aee2 pushed by huddlej
August 7, 2024 21:03 42s master
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August 7, 2024 21:03 42s
Minor text edit Deploy static content to Pages #29: Commit 8a20d87 pushed by huddlej
July 30, 2024 23:33 39s master
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July 30, 2024 23:33 39s