allow ncbi-vdb v2.x as indrect dependency of RSEM + Trinity

boegel · Jun 29, 2023 · 847cf34 · 847cf34
1 parent 80fe3e2
commit 847cf34
Showing 1 changed file with 4 additions and 3 deletions.
diff --git a/test/easyconfigs/easyconfigs.py b/test/easyconfigs/easyconfigs.py
@@ -509,10 +509,11 @@ def check_dep_vars(self, gen, dep, dep_vars):
                                                 r'QGIS-3\.28\.1']),
             ],
             'Geant4': [('11.0.1;', [r'GATE-9\.2-foss-2021b'])],
-            # ncbi-vdb v2.x requires HDF5 v1.10.x (HISAT2, SKESA, shovill depend on ncbi-vdb)
+            # ncbi-vdb v2.x requires HDF5 v1.10.x;
+            # HISAT2, RSEM, shovill, SKESA, Trinity (indirectly) depend on ncbi-vdb
             'HDF5': [
-                (r'1\.10\.', [r'ncbi-vdb-2\.11\.', r'HISAT2-2\.2\.', r'SKESA-2\.4\.',
-                              r'shovill-1\.1\.']),
+                (r'1\.10\.', [r'ncbi-vdb-2\.11\.', r'HISAT2-2\.2\.', r'RSEM-1\.3\.3',
+                              r'SKESA-2\.4\.', r'shovill-1\.1\.', r'Trinity-2\.15\.1']),
             ],
             # VMTK 1.4.x requires ITK 4.13.x
             'ITK': [(r'4\.13\.', [r'VMTK-1\.4\.'])],