CRAI fixes, better sex CN counting

brentp released this 31 Aug 15:50

· 47 commits to master since this release

v0.1.17

indexcov: dont error when no sex chromosomes are found (#27).
indexcov: dont error when some chromosomes have a single region and others have 0.
indexcov: better checking on short sex chroms and other CRAI fixes.

(thanks to Javier Prado for several test-cases on CRAM)

Assets 4