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Remove mummer dependency
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YoshitakaMo authored Aug 18, 2024
1 parent 88d9390 commit c32a5d8
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Showing 3 changed files with 3 additions and 3 deletions.
2 changes: 1 addition & 1 deletion Formula/abacas.rb
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,7 @@ class Abacas < Formula
sha256 cellar: :any_skip_relocation, x86_64_linux: "a486b8b94ea27fe8734d443487fb1a9530f5525c4416c0b94dd5a8be8d7949e9"
end

depends_on "mummer"
# Remove depends_on "brewsci/bio/mummer"

def install
inreplace "abacas.1.3.1.pl", "/usr/local/bin/perl", "/usr/bin/env perl"
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2 changes: 1 addition & 1 deletion Formula/jspecies.rb
Original file line number Diff line number Diff line change
Expand Up @@ -10,8 +10,8 @@ class Jspecies < Formula
sha256 cellar: :any_skip_relocation, sierra: "fdad5b757d32a71e196a65e6b241d30472e55c16634e0f7e777f840817bc8cc9"
end

# remove "brewsci/bio/mummer"
depends_on "brewsci/bio/blast-legacy"
depends_on "brewsci/bio/mummer"
depends_on "openjdk"

def install
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2 changes: 1 addition & 1 deletion Formula/quickmerge.rb
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ class Quickmerge < Formula
sha256 cellar: :any_skip_relocation, x86_64_linux: "980b2b1f9113b394deac9ddb5ce0acf978d19a5ce57b7d8e80bbec28a744f8ff"
end

depends_on "mummer"
# Remove depends_on "brewsci/bio/mummer"

def install
system "make", "-C", "merger"
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