Added a check for whether files can be created and executed within the configured tmp-dir #4571

Job	Run time
Validate script WDLs using womtools	57s
check if the environment has privileges	1s
Validate generated WDLs using womtools	13m 29s
build and push gatk docker to artifacts	16m 55s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	25m 0s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	26m 24s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	24m 53s
WDL test RUN_M2_WDL on cromwell	16m 37s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	13m 6s
Java 17.0.6+10 build and test cloud	16m 51s
Java 17.0.6+10 build and test integration	32m 28s
Java 17.0.6+10 build and test unit	20m 15s
Java 17.0.6+10 test on docker integration	37m 39s
Java 17.0.6+10 test on docker unit	23m 16s
Java 17.0.6+10 test on docker variantcalling	32m 48s
Java 17.0.6+10 test on docker conda	25m 3s
	5h 25m 42s

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