seqr hail search dev release #151
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| name: seqr hail search dev release | |
| on: | |
| workflow_run: | |
| workflows: ["Hail Search Unit Tests"] | |
| types: | |
| - completed | |
| branches: | |
| - dev | |
| permissions: | |
| id-token: write | |
| jobs: | |
| docker: | |
| runs-on: ubuntu-latest | |
| if: ${{ github.event.workflow_run.conclusion == 'success' }} | |
| steps: | |
| - name: checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| ref: ${{ github.event.workflow_run.head_branch }} | |
| - name: authenticate to google cloud | |
| id: "auth" | |
| uses: google-github-actions/auth@v0 | |
| with: | |
| workload_identity_provider: "${{ secrets.WORKLOAD_IDENTITY_PROVIDER }}" | |
| service_account: "${{ secrets.RUN_SA_EMAIL }}" | |
| - name: "setup gcloud sdk" | |
| uses: google-github-actions/setup-gcloud@v0 | |
| - name: Build and push images | |
| run: |- | |
| gcloud builds submit --quiet --substitutions="COMMIT_SHA=${{ github.event.workflow_run.head_sha }},_CUSTOM_BRANCH_TAG=gcloud-dev" --config .cloudbuild/seqr-hail-search-docker.cloudbuild.yaml --gcs-log-dir=gs://seqr-github-actions-logs/logs . | |
| helm_update: | |
| runs-on: ubuntu-latest | |
| needs: docker | |
| steps: | |
| - name: Retrieve tgg-helm repo for broad seqr chart | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: broadinstitute/tgg-helm | |
| token: ${{ secrets.SEQR_VERSION_UPDATE_TOKEN }} | |
| ref: main | |
| persist-credentials: false | |
| fetch-depth: 0 | |
| - name: update image tag in the dev broad seqr chart | |
| uses: mikefarah/[email protected] | |
| with: | |
| cmd: > | |
| yq -i '.seqr-platform.hail-search.image.tag = "${{ github.event.workflow_run.head_sha }}"' charts/dev-broad-seqr/values.yaml | |
| - name: Commit and Push changes | |
| uses: Andro999b/[email protected] | |
| with: | |
| repository: broadinstitute/tgg-helm | |
| branch: main | |
| github_token: ${{ secrets.SEQR_VERSION_UPDATE_TOKEN }} | |
| author_email: ${{ github.actor }}@users.noreply.github.com | |
| author_name: tgg-automation | |
| message: "Update hail-search dev release docker tag to ${{ github.event.workflow_run.head_sha }}" |