skcm_tcga_pub_2015: add TERT promoter mutations #1751
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The number of samples profiles for WES and TERT promoters is different (344 and 115 in this case). Adding TERT promoter variants to the WES MAF shows wrong percentages on the Oncoprint. |
sbabyanusha
approved these changes
Jan 24, 2023
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What?
Added TERT promoter mutations to the melanoma study.
Paper - https://pubmed.ncbi.nlm.nih.gov/26091043/
TERT promoter mutations were assessed by PCR-Sanger sequencing in a subset of 115 samples. Converted the The data is available in the Supplemental Table S1D HERE.
TERT_MUTvariable to utilized.Partially fixes #154