deploy: ba251f4

80-leiden-tutorial.html

@@ -531,7 +531,9 @@ <h2>Metadata<a class="headerlink" href="#metadata" title="Permalink to this head
 <div class="admonition note">
 <p class="admonition-title">Note</p>
 <p>We will be using QIIME 2 View (<a class="reference external" href="http://view.qiime2.org">view.qiime2.org</a>) to examine our QIIME 2 visualizations. In order to do this, we first need to grab the URL for each visualization from the workshop server. For each visualization, you’ll navigate to:</p>
-<p><a class="reference external" href="https://workshop-server.qiime2.org/%5Byour-username%5D/">https://workshop-server.qiime2.org/[your-username]/</a></p>
+<div class="highlight-shell notranslate"><div class="highlight"><pre><span></span>https://workshop-server.qiime2.org/<span class="o">[</span>your-username<span class="o">]</span>/
+</pre></div>
+</div>
 <p>From here, you’ll right click on the hyperlink associated with the visualization you’d like to view, copy the URL, navigate to QIIME 2 View and paste this URL under <code class="docutils literal notranslate"><span class="pre">a</span> <span class="pre">file</span> <span class="pre">from</span> <span class="pre">the</span> <span class="pre">web</span></code>. Note that you can also download any of these files directly from the server by left clicking on the hyperlink associated with the visualization you’d like to download.</p>
 </div>
 </section>

_sources/80-leiden-tutorial.md

@@ -96,13 +96,13 @@ qiime metadata tabulate \
   --o-visualization sample-metadata.qzv
 ```
 
-```{note}
+````{note}
 We will be using QIIME 2 View (view.qiime2.org) to examine our QIIME 2 visualizations. In order to do this, we first need to grab the URL for each visualization from the workshop server. For each visualization, you'll navigate to:
-
+```shell
 https://workshop-server.qiime2.org/[your-username]/
-
-From here, you'll right click on the hyperlink associated with the visualization you'd like to view, copy the URL, navigate to QIIME 2 View and paste this URL under `a file from the web`. Note that you can also download any of these files directly from the server by left clicking on the hyperlink associated with the visualization you'd like to download.
 ```
+From here, you'll right click on the hyperlink associated with the visualization you'd like to view, copy the URL, navigate to QIIME 2 View and paste this URL under `a file from the web`. Note that you can also download any of these files directly from the server by left clicking on the hyperlink associated with the visualization you'd like to download.
+````
 ## Read-based analysis
 ````{toggle}
 ```shell