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3D models of the abdominal organs created from a patient’s anonymized dataset of CT images from DICOM Library using semi-automatic segmentation

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AbdominalModels_Segmentation

The 3D models of the abdominal organs were created from a patient’s anonymized dataset of CT images from DICOM Library (voxel size: 0.59x0.59x0.5 mm, slice thickness: 1.46 mm, image size: 512x126x361). A semi-automatic procedure has been implemented: first, an automatic thresholding method was used to define the anatomical regions of interest, then a manual segmentation was performed to refine the extraction optimally. The available models are the following:

  • Aorta
  • Arteries and veins
  • Bladder
  • Colon
  • Gallbladder
  • Heart
  • Inferior vena cava
  • Kidneys
  • Lateral abdomen
  • Linea alba
  • Liver
  • Pancreas
  • Peritoneum
  • Portal vein
  • Rectus abdominis
  • Skin
  • Spine
  • Spleen
  • Stomach
  • Subcutaneous fat
  • Lower and upper body

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3D models of the abdominal organs created from a patient’s anonymized dataset of CT images from DICOM Library using semi-automatic segmentation

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