Add missing optional attribute to conditionally allocated variables, …

…part 2
climbfuji · Apr 3, 2024 · e0c995f · e0c995f
1 parent e2bca16
commit e0c995f
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diff --git a/physics/CONV/Chikira_Sugiyama/cs_conv_aw_adj.meta b/physics/CONV/Chikira_Sugiyama/cs_conv_aw_adj.meta
@@ -134,6 +134,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [subcldfrac]
   standard_name = subgrid_scale_cloud_fraction_from_shoc
   long_name = subgrid-scale cloud fraction from the SHOC scheme

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_cloud_diagnostics.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_cloud_diagnostics.meta
@@ -109,6 +109,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [cld_frac]
   standard_name = total_cloud_fraction
   long_name = layer total cloud fraction
@@ -125,6 +126,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [deltaZ]
   standard_name = layer_thickness
   long_name = layer_thickness

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_phys_time_vary.fv3.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_phys_time_vary.fv3.meta
@@ -789,6 +789,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [albivis_ice]
   standard_name = surface_albedo_diffuse_visible_over_ice
   long_name = diffuse surface albedo visible band over ice
@@ -806,6 +807,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [emiss_lnd]
   standard_name = surface_longwave_emissivity_over_land
   long_name = surface lw emissivity in fraction over land

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_phys_time_vary.scm.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_phys_time_vary.scm.meta
@@ -774,6 +774,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [albivis_ice]
   standard_name = surface_albedo_diffuse_visible_over_ice
   long_name = diffuse surface albedo visible band over ice
@@ -791,6 +792,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [emiss_lnd]
   standard_name = surface_longwave_emissivity_over_land
   long_name = surface lw emissivity in fraction over land

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_radiation_surface.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_radiation_surface.meta
@@ -474,6 +474,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [albivis_ice]
   standard_name = surface_albedo_diffuse_visible_over_ice
   long_name = diffuse surface albedo visible band over ice
@@ -491,6 +492,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [semisbase]
   standard_name = baseline_surface_longwave_emissivity
   long_name = baseline surface lw emissivity in fraction

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmg_pre.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmg_pre.meta
@@ -922,6 +922,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [effrr_in]
   standard_name = effective_radius_of_stratiform_cloud_rain_particle
   long_name = effective radius of cloud rain particle in micrometers

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_cloud_mp.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_cloud_mp.meta
@@ -268,6 +268,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [p_lay]
   standard_name = air_pressure_at_layer_for_RRTMGP
   long_name = air pressure at vertical layer for radiation calculation
@@ -276,6 +277,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [tv_lay]
   standard_name = virtual_temperature
   long_name = layer virtual temperature
@@ -293,6 +295,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [qs_lay]
   standard_name = saturation_vapor_pressure
   long_name = saturation vapor pressure
@@ -380,6 +383,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [qci_conv]
   standard_name = convective_cloud_condesate_after_rainout
   long_name = convective cloud condesate after rainout
@@ -621,6 +625,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [cld_pbl_iwp]
   standard_name = MYNN_SGS_cloud_ice_water_path
   long_name = layer convective cloud ice water path
@@ -629,6 +634,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [cld_pbl_reliq]
   standard_name = mean_effective_radius_for_liquid_MYNN_SGS_cloud
   long_name = mean effective radius for liquid MYNN_SGS cloud
@@ -637,6 +643,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [cld_pbl_reice]
   standard_name = mean_effective_radius_for_ice_MYNN_SGS_cloud
   long_name = mean effective radius for ice MYNN_SGS cloud
@@ -645,6 +652,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [lwp_ex]
   standard_name = liq_water_path_from_microphysics
   long_name = total liquid water path from explicit microphysics

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_cloud_overlap.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_cloud_overlap.meta
@@ -68,6 +68,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [p_lay]
   standard_name = air_pressure_at_layer_for_RRTMGP
   long_name = air pressure at vertical layer for radiation calculation
@@ -76,6 +77,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [tv_lay]
   standard_name = virtual_temperature
   long_name = layer virtual temperature
@@ -213,6 +215,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [top_at_1]
   standard_name = flag_for_vertical_ordering_in_radiation
   long_name = flag for vertical ordering in radiation

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_post.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_post.meta
@@ -166,6 +166,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [fluxlwUP_allsky]
   standard_name = RRTMGP_lw_flux_profile_upward_allsky
   long_name = RRTMGP upward longwave all-sky flux profile
@@ -174,6 +175,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [fluxlwDOWN_allsky]
   standard_name = RRTMGP_lw_flux_profile_downward_allsky
   long_name = RRTMGP downward longwave all-sky flux profile
@@ -182,6 +184,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [fluxlwUP_clrsky]
   standard_name = RRTMGP_lw_flux_profile_upward_clrsky
   long_name = RRTMGP upward longwave clr-sky flux profile
@@ -190,6 +193,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [fluxlwDOWN_clrsky]
   standard_name = RRTMGP_lw_flux_profile_downward_clrsky
   long_name = RRTMGP downward longwave clr-sky flux profile
@@ -198,6 +202,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [fluxswUP_allsky]
   standard_name = RRTMGP_sw_flux_profile_upward_allsky
   long_name = RRTMGP upward shortwave all-sky flux profile
@@ -206,6 +211,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [fluxswDOWN_allsky]
   standard_name = RRTMGP_sw_flux_profile_downward_allsky
   long_name = RRTMGP downward shortwave all-sky flux profile
@@ -214,6 +220,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [fluxswUP_clrsky]
   standard_name = RRTMGP_sw_flux_profile_upward_clrsky
   long_name = RRTMGP upward shortwave clr-sky flux profile
@@ -222,6 +229,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [fluxswDOWN_clrsky]
   standard_name = RRTMGP_sw_flux_profile_downward_clrsky
   long_name = RRTMGP downward shortwave clr-sky flux profile
@@ -230,6 +238,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [raddt]
   standard_name = time_step_for_radiation
   long_name = radiation time step

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_pre.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/GFS_rrtmgp_pre.meta
@@ -32,6 +32,7 @@
   type = character
   kind = len=128
   intent = out
+  optional = True
 [errmsg]
   standard_name = ccpp_error_message
   long_name = error message for error handling in CCPP
@@ -277,6 +278,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [p_lev]
   standard_name = air_pressure_at_interface_for_RRTMGP
   long_name = air pressure at vertical interface for radiation calculation
@@ -285,6 +287,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [t_lay]
   standard_name = air_temperature_at_layer_for_RRTMGP
   long_name = air temperature at vertical layer for radiation calculation
@@ -293,6 +296,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [t_lev]
   standard_name = air_temperature_at_interface_for_RRTMGP
   long_name = air temperature  at vertical interface for radiation calculation
@@ -301,6 +305,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [deltaZ]
   standard_name = layer_thickness
   long_name = layer_thickness
@@ -473,6 +478,7 @@
   type = character
   kind = len=*
   intent = in
+  optional = True
 [coszdg]
   standard_name = cosine_of_solar_zenith_angle_on_radiation_timestep
   long_name = daytime mean cosz over rad call period
@@ -505,6 +511,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [nday]
   standard_name = daytime_points_dimension
   long_name = daytime points dimension

diff --git a/physics/Interstitials/UFS_SCM_NEPTUNE/dcyc2t3.meta b/physics/Interstitials/UFS_SCM_NEPTUNE/dcyc2t3.meta
@@ -408,6 +408,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [t_lay]
   standard_name = air_temperature_of_new_state
   long_name = model layer mean temperature updated by physics
@@ -440,6 +441,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [flux2D_lwDOWN]
   standard_name = RRTMGP_lw_flux_profile_downward_allsky_on_radiation_timestep
   long_name = RRTMGP downward longwave all-sky flux profile
@@ -448,6 +450,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [pert_radtend]
   standard_name = flag_for_stochastic_radiative_heating_perturbations
   long_name = flag for stochastic radiative heating perturbations

diff --git a/physics/MP/GFDL/fv_sat_adj.meta b/physics/MP/GFDL/fv_sat_adj.meta
@@ -252,6 +252,7 @@
   type = real
   kind = kind_dyn
   intent = inout
+  optional = True
 [qv]
   standard_name = water_vapor_specific_humidity_at_Lagrangian_surface
   long_name = water vapor specific humidity updated by fast physics at Lagrangian surface

diff --git a/physics/MP/Morrison_Gettelman/m_micro.meta b/physics/MP/Morrison_Gettelman/m_micro.meta
@@ -695,6 +695,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [kcbl]
   standard_name = vertical_index_at_cloud_base
   long_name = vertical index at cloud base

diff --git a/physics/MP/Morrison_Gettelman/m_micro_pre.meta b/physics/MP/Morrison_Gettelman/m_micro_pre.meta
@@ -217,6 +217,7 @@
   type = real
   kind = kind_phys
   intent = inout
+  optional = True
 [clw_water]
   standard_name = cloud_condensed_water_mixing_ratio_convective_transport_tracer
   long_name = ratio of mass of cloud water to mass of dry air plus vapor (without condensates) in the convectively transported tracer array

diff --git a/physics/Radiation/RRTMGP/rrtmgp_aerosol_optics.meta b/physics/Radiation/RRTMGP/rrtmgp_aerosol_optics.meta
@@ -88,6 +88,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [p_lay]
   standard_name = air_pressure_at_layer_for_RRTMGP
   long_name = air pressure at vertical layer for radiation calculation
@@ -96,6 +97,7 @@
   type = real
   kind = kind_phys
   intent = in
+  optional = True
 [p_lk]
   standard_name = dimensionless_exner_function
   long_name = dimensionless Exner function at model layer centers