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XDK+Orf1a:T708I, S:F456L(20 seqs, 2 countries, 11 with S:A260V) #2559

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aviczhl2 opened this issue Apr 12, 2024 · 1 comment
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XDK+Orf1a:T708I, S:F456L(20 seqs, 2 countries, 11 with S:A260V) #2559

aviczhl2 opened this issue Apr 12, 2024 · 1 comment

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@aviczhl2
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From sars-cov-2-variants/lineage-proposals#1467

XDK+C25626T+C2388T(Orf1a:T708I)+ T22928C(S:F456L)

GISAID query:C2388T, T22928C,C25626T
No. of seqs: 13(France 12, Luxembourg)

First: EPI_ISL_18913117, 2024-1-24,France
Latest: EPI_ISL_19035150, 2024-3-18, France

GISAID query for S:A260V branch: C22341T,C3510T,C18646T, T22928C(10 seqs)
The Luxembourg seq is placed elsewhere due to artefacts, it shall belong to this branch.

usher

image
@aviczhl2 aviczhl2 changed the title XDK+Orf1a:T708I, S:F456L(13 seqs, 2 countries, 10 with S:A260V) XDK+Orf1a:T708I, S:F456L(14 seqs, 2 countries, 10 with S:A260V) May 4, 2024
@aviczhl2 aviczhl2 changed the title XDK+Orf1a:T708I, S:F456L(14 seqs, 2 countries, 10 with S:A260V) XDK+Orf1a:T708I, S:F456L(15 seqs, 2 countries, 10 with S:A260V) May 8, 2024
@aviczhl2 aviczhl2 changed the title XDK+Orf1a:T708I, S:F456L(15 seqs, 2 countries, 10 with S:A260V) XDK+Orf1a:T708I, S:F456L(20 seqs, 2 countries, 11 with S:A260V) May 18, 2024
@aviczhl2
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Designated XDK.4.1

FedeGueli referenced this issue May 28, 2024
@corneliusroemer
Designate XDK.4 (C25626T), XDK.4.1 (S:F456L, France/Luxembourg)
480f4d9
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