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Potential sublineage of: BA.2.12 Earliest sequence: 2022/02/05 (Australia-VIC) Most recent sequence: 2022/5/23 (Australia-TAS) Mutations on top of BA.2.12: C11674T, C17586T, G22632A (S:R357K), A27578G (ORF7a:Q62R) Countries circulating: Australia (~3.3% prevalence in Victoria, ~1.2% prevalence in Tasmania in recent 3 months as per Covspectrum) Border-entry cases:
Japan ex-Australia (1 sequence),
Singapore ex-Australia (3 sequences),
Hong Kong ex-Australia (1 sequence),
New Zealand MIQ (5 sequences) (MIQ=managed isolation & quarantine).
Description
Potential sublineage of: BA.2.12
Earliest sequence: 2022/02/05 (Australia-VIC)
Most recent sequence: 2022/5/23 (Australia-TAS)
Mutations on top of BA.2.12: C11674T, C17586T, G22632A (S:R357K), A27578G (ORF7a:Q62R)
Countries circulating: Australia (~3.3% prevalence in Victoria, ~1.2% prevalence in Tasmania in recent 3 months as per Covspectrum)
Border-entry cases:
Evidence
Nextstrain Oceania-focused subsampling dataset:
Usher tree:
https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_1915f_582a20.json?branchLabel=aa%20mutations&c=country&label=nuc%20mutations:C17586T,A27578G&tl=country
Genomes:
BA.2.12 R357K.csv
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