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Greiff Lab – Computational Systems Immunology

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  1. Absolut Absolut Public

    Unconstrained lattice antibody-antigen bindings generator

    Jupyter Notebook 98 18

  2. manuscript_insilico_antibody_generation manuscript_insilico_antibody_generation Public

    R 22 7

  3. developability_profiling developability_profiling Public

    Jupyter Notebook 12 1

  4. manuscript_progress_challenges_on-demand_antibody manuscript_progress_challenges_on-demand_antibody Public

    Jupyter Notebook 5 1

  5. mwds_calculator mwds_calculator Public

    Artificial Bee Colony - Estimation of Distribution Algorithm (ABC-EDA) is an algorithm to compute minimum weight dominating sets of undirected weighted networks. Adapted from Singh's and Shetgaonka…

    Python 3

  6. negative-class-optimization negative-class-optimization Public

    Jupyter Notebook 2

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  • negative-class-optimization Public
    csi-greifflab/negative-class-optimization’s past year of commit activity
    Jupyter Notebook 2 AGPL-3.0 0 0 0 Updated Sep 6, 2024
  • airrtm Public
    csi-greifflab/airrtm’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Jul 17, 2024
  • airrtm_data Public
    csi-greifflab/airrtm_data’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Jul 16, 2024
  • Absolut Public

    Unconstrained lattice antibody-antigen bindings generator

    csi-greifflab/Absolut’s past year of commit activity
    Jupyter Notebook 98 18 7 0 Updated Jul 1, 2024
  • developability_profiling Public
    csi-greifflab/developability_profiling’s past year of commit activity
    Jupyter Notebook 12 1 2 0 Updated Jun 11, 2024
  • Preexisting-immunity-influenza-mice Public

    Code, figures, and processed data for the manuscript

    csi-greifflab/Preexisting-immunity-influenza-mice’s past year of commit activity
    0 0 0 0 Updated Feb 20, 2024
  • manuscript_bulkseq-scseq-abseq_integration Public
    csi-greifflab/manuscript_bulkseq-scseq-abseq_integration’s past year of commit activity
    R 0 0 0 0 Updated Nov 2, 2023
  • manuscript_short_motif_data_processing_supplementary Public
    csi-greifflab/manuscript_short_motif_data_processing_supplementary’s past year of commit activity
    Python 0 AGPL-3.0 0 0 0 Updated Oct 21, 2023
  • manuscript_short_motif_experimental_computational_supplementary Public
    csi-greifflab/manuscript_short_motif_experimental_computational_supplementary’s past year of commit activity
    0 0 0 0 Updated Jun 12, 2023
  • mwds_calculator Public

    Artificial Bee Colony - Estimation of Distribution Algorithm (ABC-EDA) is an algorithm to compute minimum weight dominating sets of undirected weighted networks. Adapted from Singh's and Shetgaonkar's publication, "Hybridization of Artificial Bee Colony Algorithm with Estimation of Distribution Algorithm for Minimum Weight Dominating Set Problem…

    csi-greifflab/mwds_calculator’s past year of commit activity
    Python 3 AGPL-3.0 0 0 0 Updated Feb 15, 2023
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