Install backups2datalad from new repository

dandi · Dec 4, 2023 · e4bce86 · e4bce86
1 parent 1259665
commit e4bce86
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Showing 7 changed files with 10 additions and 10 deletions.
diff --git a/tools/backups2datalad-108 b/tools/backups2datalad-108
@@ -15,7 +15,7 @@ source ~/.bashrc-miniconda
 conda activate dandisets-2
 
 cd "$ds"
-chronic pip install -r tools/backups2datalad.req.txt
+chronic pip install git+https://github.com/dandi/backups2datalad
 
 export DATALAD_LOG_LEVEL=WARNING  # otherwise too much of noise
 
@@ -25,7 +25,7 @@ set -o pipefail
 set -x
 
 (
-eval python -m tools.backups2datalad \
+eval backups2datalad \
    -l WARNING \
    -J 5 \
    --target "$ds" \
@@ -40,13 +40,13 @@ eval python -m tools.backups2datalad \
 echo "we do not care about the rest in this one"
 exit 0
 
-python -m tools.backups2datalad \
+backups2datalad \
    -l DEBUG \
    -J 5 \
    --target "$ds" \
    populate dandi-dandisets-dropbox 000108
 
-python -m tools.backups2datalad \
+backups2datalad \
    -l DEBUG \
    -J 5 \
    populate-zarrs --zarr-target "$zarrds" dandi-dandizarrs-dropbox

diff --git a/tools/backups2datalad-backup-zarrs-108 b/tools/backups2datalad-backup-zarrs-108
@@ -1,7 +1,7 @@
 #!/bin/bash
 source "$(dirname "$0")"/backups2datalad-cron-common
 
-python -m tools.backups2datalad \
+backups2datalad \
     -l WARNING \
     --backup-root "$backup_root" \
     --config tools/backups2datalad.cfg.yaml \

diff --git a/tools/backups2datalad-cron-common b/tools/backups2datalad-cron-common
@@ -12,7 +12,7 @@ source ~/.bashrc-miniconda
 conda activate dandisets-2
 
 cd "$ds"
-chronic pip install -r tools/backups2datalad.req.txt
+chronic pip install git+https://github.com/dandi/backups2datalad
 
 : "${DATALAD_LOG_LEVEL:=WARNING}"  # otherwise too much noise
 export DATALAD_LOG_LEVEL

diff --git a/tools/backups2datalad-populate-assets-cron b/tools/backups2datalad-populate-assets-cron
@@ -1,7 +1,7 @@
 #!/bin/bash
 source "$(dirname "$0")"/backups2datalad-cron-common
 
-python -m tools.backups2datalad \
+backups2datalad \
    -l DEBUG \
    --backup-root "$backup_root" \
    --config tools/backups2datalad.cfg.yaml \

diff --git a/tools/backups2datalad-populate-zarrs-cron b/tools/backups2datalad-populate-zarrs-cron
@@ -1,7 +1,7 @@
 #!/bin/bash
 source "$(dirname "$0")"/backups2datalad-cron-common
 
-python -m tools.backups2datalad \
+backups2datalad \
    -l DEBUG \
    --backup-root "$backup_root" \
    --config tools/backups2datalad.cfg.yaml \

diff --git a/tools/backups2datalad-update-cron b/tools/backups2datalad-update-cron
@@ -3,7 +3,7 @@
 source "$(dirname "$0")"/backups2datalad-cron-common
 
 (
-python -m tools.backups2datalad \
+backups2datalad \
    -l WARNING \
    --backup-root "$backup_root" \
    --config tools/backups2datalad.cfg.yaml \

diff --git a/tools/backups2datalad-update-cron-zarrs b/tools/backups2datalad-update-cron-zarrs
@@ -2,7 +2,7 @@
 # Just the update portion
 source "$(dirname "$0")"/backups2datalad-cron-common
 
-eval python -m tools.backups2datalad \
+eval backups2datalad \
    -l WARNING \
    --backup-root "$backup_root" \
    --config tools/backups2datalad.cfg.yaml \