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manubot/cite/tests/cite-command-rendered/references-html-2.11.2.html
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| <div id="refs" class="references csl-bib-body hanging-indent" role="doc-bibliography"> | ||
| <div id="ref-s33GCagP" class="csl-entry" role="doc-biblioentry"> | ||
| <div class="csl-left-margin">1. </div><div class="csl-right-inline"><strong>Generalization of the Fermi Pseudopotential</strong><span class="csl-block">Trang T. Le, Zach Osman, D. K. Watson, Martin Dunn, B. A. McKinney</span><em>arXiv</em> (2018-06-14) <a href="https://arxiv.org/abs/1806.05726v1">https://arxiv.org/abs/1806.05726v1</a><span class="csl-block">DOI: <a href="https://doi.org/10.1088/1402-4896/ab0811">10.1088/1402-4896/ab0811</a></span></div> | ||
| </div> | ||
| <div id="ref-5thZNGfr" class="csl-entry" role="doc-biblioentry"> | ||
| <div class="csl-left-margin">2. </div><div class="csl-right-inline"><strong>Honey bee sting pain index by body location</strong><span class="csl-block">Michael L Smith</span><em>PeerJ</em> (2014-04-03) <a href="https://doi.org/gfrfbm">https://doi.org/gfrfbm</a><span class="csl-block">DOI: <a href="https://doi.org/10.7717/peerj.338">10.7717/peerj.338</a> · PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/24765572">24765572</a> · PMCID: <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994616">PMC3994616</a></span></div> | ||
| </div> | ||
| <div id="ref-299ObJlC" class="csl-entry" role="doc-biblioentry"> | ||
| <div class="csl-left-margin">3. </div><div class="csl-right-inline"><strong>Opportunities and obstacles for deep learning in biology and medicine.</strong><span class="csl-block">Travers Ching, Daniel S Himmelstein, Brett K Beaulieu-Jones, Alexandr A Kalinin, Brian T Do, Gregory P Way, Enrico Ferrero, Paul-Michael Agapow, Michael Zietz, Michael M Hoffman, … Casey S Greene</span><em>Journal of the Royal Society, Interface</em> (2018-04) <a href="https://www.ncbi.nlm.nih.gov/pubmed/29618526">https://www.ncbi.nlm.nih.gov/pubmed/29618526</a><span class="csl-block">DOI: <a href="https://doi.org/10.1098/rsif.2017.0387">10.1098/rsif.2017.0387</a> · PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/29618526">29618526</a> · PMCID: <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5938574">PMC5938574</a></span></div> | ||
| </div> | ||
| </div> |
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manubot/cite/tests/cite-command-rendered/references-jats-2.11.2.xml
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| <?xml version="1.0" encoding="utf-8" ?> | ||
| <!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Archiving and Interchange DTD v1.2 20190208//EN" | ||
| "JATS-archivearticle1.dtd"> | ||
| <article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="1.2" article-type="other"> | ||
| <front> | ||
| <journal-meta> | ||
| <journal-id></journal-id> | ||
| <journal-title-group> | ||
| </journal-title-group> | ||
| <issn></issn> | ||
| <publisher> | ||
| <publisher-name></publisher-name> | ||
| </publisher> | ||
| </journal-meta> | ||
| <article-meta> | ||
| </article-meta> | ||
| </front> | ||
| <body> | ||
|
|
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| </body> | ||
| <back> | ||
| <ref-list> | ||
| {{jats}}<ref | ||
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| T. Le{{jats}}</surname>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Zach | ||
| Osman{{jats}}</surname>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}D. K. | ||
| Watson{{jats}}</surname>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Martin | ||
| Dunn{{jats}}</surname>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}B. A. | ||
| McKinney{{jats}}</surname>{{/jats}}{{jats}}</name>{{/jats}}{{jats}}</person-group>{{/jats}}{{jats}}<article-title>{{/jats}}Generalization | ||
| of the Fermi | ||
| Pseudopotential{{jats}}</article-title>{{/jats}}{{jats}}<source>{{/jats}}arXiv{{jats}}</source>{{/jats}}{{jats}}<publisher-name>{{/jats}}arXiv{{jats}}</publisher-name>{{/jats}}{{jats}}<date>{{/jats}}{{jats}}<day>{{/jats}}14{{jats}}</day>{{/jats}}{{jats}}<month>{{/jats}}06{{jats}}</month>{{/jats}}{{jats}}<year>{{/jats}}2018{{jats}}</year>{{/jats}}{{jats}}</date>{{/jats}}{{jats}}<pub-id | ||
| pub-id-type="doi">{{/jats}}<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.1088/1402-4896/ab0811">10.1088/1402-4896/ab0811</ext-link>{{jats}}</pub-id>{{/jats}}<ext-link ext-link-type="uri" xlink:href="https://arxiv.org/abs/1806.05726v1">https://arxiv.org/abs/1806.05726v1</ext-link>{{jats}}</element-citation>{{/jats}}{{jats}}</ref>{{/jats}} | ||
| {{jats}}<ref | ||
| {{/jats}}{{jats}}id="ref-{{/jats}}2{{jats}}">{{/jats}}{{jats}}<element-citation{{/jats}}{{jats}} | ||
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| {{jats}}<given-names>{{/jats}}Michael | ||
| L.{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}{{jats}}</person-group>{{/jats}}{{jats}}<article-title>{{/jats}}Honey | ||
| bee sting pain index by body | ||
| location{{jats}}</article-title>{{/jats}}{{jats}}<source>{{/jats}}PeerJ{{jats}}</source>{{/jats}}{{jats}}<publisher-name>{{/jats}}PeerJ{{jats}}</publisher-name>{{/jats}}{{jats}}<date>{{/jats}}{{jats}}<day>{{/jats}}03{{jats}}</day>{{/jats}}{{jats}}<month>{{/jats}}04{{jats}}</month>{{/jats}}{{jats}}<year>{{/jats}}2014{{jats}}</year>{{/jats}}{{jats}}</date>{{/jats}}{{jats}}<volume>{{/jats}}2{{jats}}</volume>{{/jats}}{{jats}}<fpage>{{/jats}}e338{{jats}}</fpage>{{/jats}}{{jats}}<pub-id | ||
| pub-id-type="doi">{{/jats}}<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.7717/peerj.338">10.7717/peerj.338</ext-link>{{jats}}</pub-id>{{/jats}}{{jats}}<pub-id | ||
| pub-id-type="pmid">{{/jats}}<ext-link ext-link-type="uri" xlink:href="https://www.ncbi.nlm.nih.gov/pubmed/24765572">24765572</ext-link>{{jats}}</pub-id>{{/jats}}<ext-link ext-link-type="uri" xlink:href="https://doi.org/gfrfbm">https://doi.org/gfrfbm</ext-link>{{jats}}</element-citation>{{/jats}}{{jats}}</ref>{{/jats}} | ||
| {{jats}}<ref | ||
| {{/jats}}{{jats}}id="ref-{{/jats}}3{{jats}}">{{/jats}}{{jats}}<element-citation{{/jats}}{{jats}} | ||
| publication-type="{{/jats}}journal{{jats}}">{{/jats}}{{jats}}<person-group | ||
| person-group-type="author">{{/jats}}{{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Ching{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Travers{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Himmelstein{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Daniel | ||
| S{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Beaulieu-Jones{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Brett | ||
| K{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Kalinin{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Alexandr | ||
| A{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Do{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Brian | ||
| T{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Way{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Gregory | ||
| P{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Ferrero{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Enrico{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Agapow{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Paul-Michael{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Zietz{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Michael{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Hoffman{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Michael | ||
| M{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Xie{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Wei{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Rosen{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Gail | ||
| L{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Lengerich{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Benjamin | ||
| J{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Israeli{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Johnny{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Lanchantin{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Jack{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Woloszynek{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Stephen{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Carpenter{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Anne | ||
| E{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Shrikumar{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Avanti{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Xu{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Jinbo{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Cofer{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Evan | ||
| M{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Lavender{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Christopher | ||
| A{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Turaga{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Srinivas | ||
| C{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Alexandari{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Amr | ||
| M{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Lu{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Zhiyong{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Harris{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}David | ||
| J{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}DeCaprio{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Dave{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Qi{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Yanjun{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Kundaje{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Anshul{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Peng{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Yifan{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Wiley{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Laura | ||
| K{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Segler{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Marwin H | ||
| S{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Boca{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Simina | ||
| M{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Swamidass{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}S | ||
| Joshua{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Huang{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Austin{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Gitter{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Anthony{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}, | ||
| {{jats}}<name>{{/jats}}{{jats}}<surname>{{/jats}}Greene{{jats}}</surname>{{/jats}} | ||
| {{jats}}<given-names>{{/jats}}Casey | ||
| S{{jats}}</given-names>{{/jats}}{{jats}}</name>{{/jats}}{{jats}}</person-group>{{/jats}}{{jats}}<article-title>{{/jats}}Opportunities | ||
| and obstacles for deep learning in biology and | ||
| medicine.{{jats}}</article-title>{{/jats}}{{jats}}<source>{{/jats}}J | ||
| R Soc | ||
| Interface{{jats}}</source>{{/jats}}{{jats}}<date>{{/jats}}{{jats}}<month>{{/jats}}04{{jats}}</month>{{/jats}}{{jats}}<year>{{/jats}}2018{{jats}}</year>{{/jats}}{{jats}}</date>{{/jats}}{{jats}}<volume>{{/jats}}15{{jats}}</volume>{{/jats}}{{jats}}<issue>{{/jats}}141{{jats}}</issue>{{/jats}}{{jats}}<pub-id | ||
| pub-id-type="doi">{{/jats}}<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.1098/rsif.2017.0387">10.1098/rsif.2017.0387</ext-link>{{jats}}</pub-id>{{/jats}}{{jats}}<pub-id | ||
| pub-id-type="pmid">{{/jats}}<ext-link ext-link-type="uri" xlink:href="https://www.ncbi.nlm.nih.gov/pubmed/29618526">29618526</ext-link>{{jats}}</pub-id>{{/jats}}<ext-link ext-link-type="uri" xlink:href="https://www.ncbi.nlm.nih.gov/pubmed/29618526">https://www.ncbi.nlm.nih.gov/pubmed/29618526</ext-link>{{jats}}</element-citation>{{/jats}}{{jats}}</ref>{{/jats}} | ||
| </ref-list> | ||
| </back> | ||
| </article> |
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manubot/cite/tests/cite-command-rendered/references-markdown-2.11.2.md
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| <span class="csl-left-margin">1. </span><span class="csl-right-inline">**Generalization of the Fermi Pseudopotential**<span class="csl-block">Trang T. Le, Zach Osman, D. K. Watson, Martin Dunn, B. A. McKinney</span>*arXiv* (2018-06-14) <https://arxiv.org/abs/1806.05726v1><span class="csl-block">DOI: [10.1088/1402-4896/ab0811](https://doi.org/10.1088/1402-4896/ab0811)</span></span> | ||
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| <span class="csl-left-margin">2. </span><span class="csl-right-inline">**Honey bee sting pain index by body location**<span class="csl-block">Michael L Smith</span>*PeerJ* (2014-04-03) <https://doi.org/gfrfbm><span class="csl-block">DOI: [10.7717/peerj.338](https://doi.org/10.7717/peerj.338) · PMID: [24765572](https://www.ncbi.nlm.nih.gov/pubmed/24765572) · PMCID: [PMC3994616](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994616)</span></span> | ||
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| <span class="csl-left-margin">3. </span><span class="csl-right-inline">**Opportunities and obstacles for deep learning in biology and medicine.**<span class="csl-block">Travers Ching, Daniel S Himmelstein, Brett K Beaulieu-Jones, Alexandr A Kalinin, Brian T Do, Gregory P Way, Enrico Ferrero, Paul-Michael Agapow, Michael Zietz, Michael M Hoffman, … Casey S Greene</span>*Journal of the Royal Society, Interface* (2018-04) <https://www.ncbi.nlm.nih.gov/pubmed/29618526><span class="csl-block">DOI: [10.1098/rsif.2017.0387](https://doi.org/10.1098/rsif.2017.0387) · PMID: [29618526](https://www.ncbi.nlm.nih.gov/pubmed/29618526) · PMCID: [PMC5938574](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5938574)</span></span> |
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manubot/cite/tests/cite-command-rendered/references-plain-2.11.2.txt
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| 1. Generalization of the Fermi PseudopotentialTrang T. Le, Zach Osman, D. K. Watson, Martin Dunn, B. A. McKinneyarXiv (2018-06-14) https://arxiv.org/abs/1806.05726v1DOI: 10.1088/1402-4896/ab0811 | ||
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| 2. Honey bee sting pain index by body locationMichael L SmithPeerJ (2014-04-03) https://doi.org/gfrfbmDOI: 10.7717/peerj.338 · PMID: 24765572 · PMCID: PMC3994616 | ||
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| 3. Opportunities and obstacles for deep learning in biology and medicine.Travers Ching, Daniel S Himmelstein, Brett K Beaulieu-Jones, Alexandr A Kalinin, Brian T Do, Gregory P Way, Enrico Ferrero, Paul-Michael Agapow, Michael Zietz, Michael M Hoffman, … Casey S GreeneJournal of the Royal Society, Interface (2018-04) https://www.ncbi.nlm.nih.gov/pubmed/29618526DOI: 10.1098/rsif.2017.0387 · PMID: 29618526 · PMCID: PMC5938574 |