env: Python 2.7: no such file or directory

[kris10wing]

When trying to source environment, I keep getting error msg env: python2.7: No such file or directory. I've installed dxpy using Python3 as instructed. Anyone else have trouble with this?

[gtrisha29]

I am having this issue as well - were you able to get it resolved?

[kris10wing]

I was able to get that resolved. I went into the bin folder and changed every dx file that had #!/usr/bin/env python2.7 at the top to #!/usr/bin/env python3. That seemed to work, and I was able to build my app. However,I now have UTF python encoding error when I try to run my app in DNAnexus. I don't know if changing the files may raise this error or if this is a separate issue.

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________________________________ From: gtrisha29 ***@***.***> Sent: Thursday, October 5, 2023 1:13 PM To: dnanexus/dx-toolkit ***@***.***> Cc: Wingert, Kristen ***@***.***>; Author ***@***.***> Subject: Re: [dnanexus/dx-toolkit] env: Python 2.7: no such file or directory (Issue #1220) [WARNING - External Email] This email originated from outside of Hood College. DO NOT click on links, open attachments or respond to requests if you were not expecting this email. I am having this issue as well - were you able to get it resolved? — Reply to this email directly, view it on GitHub<#1220 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/A2XQIHF7QZQHW6APWX6TAWLX53TDLAVCNFSM6AAAAAA5H6FIOGVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTONBZGMZTIMZRGM>. You are receiving this because you authored the thread.Message ID: ***@***.***>

[gtrisha29]

I was able to get it resolved too and followed these instructions to build it from source (which included installing python 2.7):
https://github.com/dnanexus/dx-toolkit/blob/master/Readme-osx.md
When I then ran $cd dx-toolkit && source environment, I was able to log in.

[kris10wing]

Thanks. Maybe I'll try that and I won't get the other error.

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________________________________ From: gtrisha29 ***@***.***> Sent: Thursday, October 5, 2023 4:23 PM To: dnanexus/dx-toolkit ***@***.***> Cc: Wingert, Kristen ***@***.***>; Author ***@***.***> Subject: Re: [dnanexus/dx-toolkit] env: Python 2.7: no such file or directory (Issue #1220) [WARNING - External Email] This email originated from outside of Hood College. DO NOT click on links, open attachments or respond to requests if you were not expecting this email. I was able to get it resolved too and followed these instructions to build it from source (which included installing python 2.7): https://github.com/dnanexus/dx-toolkit/blob/master/Readme-osx.md When I then ran $cd dx-toolkit && source environment, I was able to log in. — Reply to this email directly, view it on GitHub<#1220 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/A2XQIHFR2AUMRJZUZFUDAG3X54JM7AVCNFSM6AAAAAA5H6FIOGVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTONBZGU4TANJRGM>. You are receiving this because you authored the thread.Message ID: ***@***.***>

[kris10wing]

When building from source, did you get an error when trying to install gcc11?

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________________________________ From: gtrisha29 ***@***.***> Sent: Thursday, October 5, 2023 4:23 PM To: dnanexus/dx-toolkit ***@***.***> Cc: Wingert, Kristen ***@***.***>; Author ***@***.***> Subject: Re: [dnanexus/dx-toolkit] env: Python 2.7: no such file or directory (Issue #1220) [WARNING - External Email] This email originated from outside of Hood College. DO NOT click on links, open attachments or respond to requests if you were not expecting this email. I was able to get it resolved too and followed these instructions to build it from source (which included installing python 2.7): https://github.com/dnanexus/dx-toolkit/blob/master/Readme-osx.md When I then ran $cd dx-toolkit && source environment, I was able to log in. — Reply to this email directly, view it on GitHub<#1220 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/A2XQIHFR2AUMRJZUZFUDAG3X54JM7AVCNFSM6AAAAAA5H6FIOGVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTONBZGU4TANJRGM>. You are receiving this because you authored the thread.Message ID: ***@***.***>