Feature #2297 gha

.github/jobs/get_branch_name.sh

@@ -11,5 +11,5 @@ fi
 
 branch_name=${branch_name#"refs/heads/"}
 
-echo ::set-output name=branch_name::$branch_name
+echo "branch_name=${branch_name}" >> $GITHUB_OUTPUT
 echo branch_name: $branch_name

.github/jobs/set_job_controls.sh

@@ -108,15 +108,15 @@ if [ "$run_unit_tests" == "true" ]; then
 
 fi
 
-echo ::set-output name=run_compile::$run_compile
-echo ::set-output name=run_push::$run_push
-echo ::set-output name=run_unit_tests::$run_unit_tests
-echo ::set-output name=run_diff::$run_diff
-echo ::set-output name=run_update_truth::$run_update_truth
-echo ::set-output name=met_base_repo::$met_base_repo
-echo ::set-output name=met_base_tag::$met_base_tag
-echo ::set-output name=input_data_version::$input_data_version
-echo ::set-output name=truth_data_version::$truth_data_version
+echo "run_compile=${run_compile}" >> $GITHUB_OUTPUT
+echo "run_push=${run_push}" >> $GITHUB_OUTPUT
+echo "run_unit_tests=${run_unit_tests}" >> $GITHUB_OUTPUT
+echo "run_diff=${run_diff}" >> $GITHUB_OUTPUT
+echo "run_update_truth=${run_update_truth}" >> $GITHUB_OUTPUT
+echo "met_base_repo=${met_base_repo}" >> $GITHUB_OUTPUT
+echo "met_base_tag=${met_base_tag}" >> $GITHUB_OUTPUT
+echo "input_data_version=${input_data_version}" >> $GITHUB_OUTPUT
+echo "truth_data_version=${truth_data_version}" >> $GITHUB_OUTPUT
 
 echo run_compile: $run_compile
 echo run_push: $run_push

.github/workflows/build_docker_and_trigger_metplus.yml

@@ -22,7 +22,7 @@ jobs:
 
       - name: Get branch name
         id: get_branch_name
-        run: echo ::set-output name=branch_name::${GITHUB_REF#"refs/heads/"}
+        run: echo "branch_name::${GITHUB_REF#\"refs/heads/\"}" >> $GITHUB_OUTPUT
 
       - name: Build Docker Image
         run: .github/jobs/build_docker_image.sh

.github/workflows/documentation.yml

@@ -11,14 +11,15 @@ on:
       - met/docs/**
   pull_request:
     types: [opened, reopened, synchronize]
+  workflow_dispatch:
 
 jobs:
   documentation:
     name: Build Documentation
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
-      - uses: actions/setup-python@v2
+      - uses: actions/checkout@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: '3.6'
       - name: Install dependencies
@@ -27,12 +28,12 @@ jobs:
           sphinx-gallery Pillow sphinx_rtd_theme sphinx-panels
       - name: Build docs
         run: ./.github/jobs/build_documentation.sh
-      - uses: actions/upload-artifact@v2
+      - uses: actions/upload-artifact@v3
         if: always()
         with:
           name: documentation
           path: artifact/documentation
-      - uses: actions/upload-artifact@v2
+      - uses: actions/upload-artifact@v3
         if: failure()
         with:
           name: documentation_warnings.log

.github/workflows/testing.yml

@@ -40,7 +40,7 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
       - name: Set job controls
         id: job_status
         run: .github/jobs/set_job_controls.sh
@@ -66,7 +66,7 @@ jobs:
     needs: job_control
     if: ${{ needs.job_control.outputs.run_compile == 'true' }}
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Create directories to store output
         run: mkdir -p ${RUNNER_WORKSPACE}/logs
@@ -92,7 +92,7 @@ jobs:
 
       - name: Upload logs as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: logs
           path: ${{ runner.workspace }}/logs
@@ -126,7 +126,7 @@ jobs:
           - 'pb2nc madis2nc pcp_combine'
       fail-fast: false
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Run Unit Tests in Docker
         run: .github/jobs/run_unit_docker.sh
@@ -136,14 +136,14 @@ jobs:
           INPUT_DATA_VERSION: ${{ needs.job_control.outputs.input_data_version }}-all
 
       - name: Upload output as artifact
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: unit_1a
           path: ${{ runner.workspace }}/output
 
       - name: Upload logs as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: logs
           path: ${{ runner.workspace }}/logs
@@ -161,7 +161,7 @@ jobs:
           - 'met_test_scripts mode_multivar mode_graphics mtd regrid airnow gsi_tools netcdf modis series_analysis gen_ens_prod wwmca_regrid gen_vx_mask grid_weight interp_shape grid_diag grib_tables lidar2nc shift_data_plane trmm2nc aeronet wwmca_plot ioda2nc gaussian'
       fail-fast: false
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Run Unit Tests in Docker
         run: .github/jobs/run_unit_docker.sh
@@ -171,14 +171,14 @@ jobs:
           INPUT_DATA_VERSION: ${{ needs.job_control.outputs.input_data_version }}-all
 
       - name: Upload output as artifact
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: unit_1b
           path: ${{ runner.workspace }}/output
 
       - name: Upload logs as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: logs
           path: ${{ runner.workspace }}/logs
@@ -197,7 +197,7 @@ jobs:
           - 'ref_config_lead_36'
       fail-fast: false
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Run Unit Tests in Docker
         run: .github/jobs/run_unit_docker.sh
@@ -207,14 +207,14 @@ jobs:
           INPUT_DATA_VERSION: ${{ needs.job_control.outputs.input_data_version }}-all
 
       - name: Upload output as artifact
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: unit_rc_leads
           path: ${{ runner.workspace }}/output
 
       - name: Upload logs as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: logs
           path: ${{ runner.workspace }}/logs
@@ -231,10 +231,10 @@ jobs:
           - 'ref_config'
       fail-fast: false
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Download ref_config_leads output from artifact
-        uses: actions/download-artifact@v2
+        uses: actions/download-artifact@v3
         with:
           name: unit_rc_leads
           path: ${{ runner.workspace }}/output
@@ -247,14 +247,14 @@ jobs:
           INPUT_DATA_VERSION: 'none'
 
       - name: Upload output as artifact
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: unit_rc
           path: ${{ runner.workspace }}/output
 
       - name: Upload logs as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: logs
           path: ${{ runner.workspace }}/logs
@@ -274,10 +274,10 @@ jobs:
           - 'ensemble_stat stat_analysis_es'
       fail-fast: false
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Download 1a output from artifact
-        uses: actions/download-artifact@v2
+        uses: actions/download-artifact@v3
         with:
           name: unit_1a
           path: ${{ runner.workspace }}/output
@@ -290,14 +290,14 @@ jobs:
           INPUT_DATA_VERSION: ${{ needs.job_control.outputs.input_data_version }}-all
 
       - name: Upload output as artifact
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: unit_2a
           path: ${{ runner.workspace }}/output
 
       - name: Upload logs as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: logs
           path: ${{ runner.workspace }}/logs
@@ -317,10 +317,10 @@ jobs:
           - 'python point2grid plot_data_plane mode mode_analysis perc_thresh hira plot_point_obs quality_filter obs_summary duplicate_flag'
       fail-fast: false
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Download 1a output from artifact
-        uses: actions/download-artifact@v2
+        uses: actions/download-artifact@v3
         with:
           name: unit_1a
           path: ${{ runner.workspace }}/output
@@ -333,14 +333,14 @@ jobs:
           INPUT_DATA_VERSION: ${{ needs.job_control.outputs.input_data_version }}-all
 
       - name: Upload output as artifact
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: unit_2b
           path: ${{ runner.workspace }}/output
 
       - name: Upload logs as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: logs
           path: ${{ runner.workspace }}/logs
@@ -353,14 +353,14 @@ jobs:
     if: ${{ needs.job_control.outputs.run_diff == 'true' }}
     steps:
       - name: Download data from previous jobs
-        uses: actions/download-artifact@v2
+        uses: actions/download-artifact@v3
 
       - name: Copy test output into single directory
         run: |
           mkdir ${RUNNER_WORKSPACE}/output
           cp -r unit_*/* ${RUNNER_WORKSPACE}/output/
 
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Run Diff Tests in Docker
         run: .github/jobs/run_diff_docker.sh
@@ -371,15 +371,15 @@ jobs:
 
       - name: Upload diff files as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: diff
           path: ${{ runner.workspace }}/diff
           if-no-files-found: ignore
 
       - name: Upload logs as artifact
         if: always()
-        uses: actions/upload-artifact@v2
+        uses: actions/upload-artifact@v3
         with:
           name: logs
           path: ${{ runner.workspace }}/logs
@@ -391,10 +391,10 @@ jobs:
     needs: [job_control, unit_1b, unit_2a, unit_2b, unit_rc]
     if: ${{ needs.job_control.outputs.run_update_truth == 'true' }}
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - name: Download data from previous jobs
-        uses: actions/download-artifact@v2
+        uses: actions/download-artifact@v3
 
       - name: Copy test output into single directory
         run: |

docs/Users_Guide/grid-stat.rst

@@ -14,7 +14,6 @@ Scientific and statistical aspects of the Grid-Stat tool are briefly described i
 Scientific and statistical aspects
 ==================================
 
-
 Statistical measures
 --------------------