{bio}[system/system] CellRanger-ARC v2.0.2

easybuild/easyconfigs/c/CellRanger-ARC/CellRanger-ARC-2.0.2.eb

@@ -0,0 +1,37 @@
+# The STAR binary included in this version has been vectorized with AVX
+# hence it is not recommended for systems that do not support it.
+
+easyblock = 'Tarball'
+
+name = 'CellRanger-ARC'
+version = '2.0.2'
+
+homepage = 'https://support.10xgenomics.com/single-cell-multiome-atac-gex/software/pipelines/latest/'
+homepage += 'what-is-cell-ranger-arc'
+description = """Cell Ranger ARC is a set of analysis pipelines that process
+ Chromium Single Cell Multiome ATAC + Gene Expression sequencing data to generate a
+ variety of analyses pertaining to gene expression, chromatin accessibility and
+ their linkage. Furthermore, since the ATAC and gene expression measurements are on
+ the very same cell, we are able to perform analyses that link chromatin
+ accessibility and gene expression."""
+
+toolchain = SYSTEM
+
+download_instructions = """
+Download manually from:
+https://www.10xgenomics.com/support/software/cell-ranger-arc/downloads
+"""
+
+sources = [SOURCELOWER_TAR_GZ]
+checksums = ['02a02457938dcf8dcb418b6c65effac06b210282d167437bfa8b2f10023dacae']
+
+keepsymlinks = True
+
+sanity_check_paths = {
+    'files': ["bin/cellranger-arc"],
+    'dirs': ["bin/rna", "bin/tenkit"],
+}
+
+sanity_check_commands = ['cellranger-arc -h']
+
+moduleclass = 'bio'