Elife assessment updates

src/Controller/ArticlesController.php

@@ -32,6 +32,7 @@
 use eLife\Journal\Helper\HasPages;
 use eLife\Journal\Helper\Humanizer;
 use eLife\Patterns\ViewModel;
+use eLife\Patterns\ViewModel\Assessment;
 use eLife\Patterns\ViewModel\ArticleSection;
 use eLife\Patterns\ViewModel\ContentAside;
 use eLife\Patterns\ViewModel\ContentHeaderNew;
@@ -46,6 +47,7 @@
 use eLife\Patterns\ViewModel\ReadMoreItem;
 use eLife\Patterns\ViewModel\SpeechBubble;
 use eLife\Patterns\ViewModel\TabbedNavigation;
+use eLife\Patterns\ViewModel\Term;
 use eLife\Patterns\ViewModel\ViewSelector;
 use GuzzleHttp\Promise\PromiseInterface;
 use Symfony\Component\HttpFoundation\RedirectResponse;
@@ -309,22 +311,33 @@ private function createFirstPage(Request $request, string $id, array $arguments)
 
                 if ($item instanceof ArticleVoR && $item->getElifeAssessment()) {
                     $first = true;
-                    $relatedLinks = [];
-
-                    $relatedLinks[] = new Link('Read the peer reviews', $this->generatePath($history, $item->getVersion(), 'peer-reviews', 'content'));
-                    $relatedLinks[] = new Link('About eLife assessments', $this->get('router')->generate('inside-elife-article', ['id'=> 'db24dd46']));
+                    $summary = 'During the peer-review process the editor and reviewers write an eLife Assessment that summarises the significance of the findings reported in the article (on a scale ranging from landmark to useful) and the strength of the evidence (on a scale ranging from exceptional to inadequate). <a href="https://elifesciences.org/about/elife-assessments">Learn more about eLife Assessments</a>';
+                    $significanceTerms = [['term' => 'Landmark'], ['term' => 'Fundamental'], ['term' => 'Important'], ['term' => 'Valuable'], ['term' => 'Useful']];
+                    $strengthTerms = [['term' => 'Exceptional'], ['term' => 'Compelling'], ['term' => 'Convincing'], ['term' => 'Solid'], ['term' => 'Incomplete'], ['term' => 'Inadequate']];
+                    $content = $item->getElifeAssessment()->getContent();
+                    $resultSignificance = $this->highlightAndFormatTerms($content, $significanceTerms);
+                    $resultStrength = $this->highlightAndFormatTerms($content, $strengthTerms);
+                    $significanceAriaLable = 'eLife assessments use a common vocabulary to describe significance. The term chosen for this paper is:';
+                    $strengthAriaLable = 'eLife assessments use a common vocabulary to describe strength of evidence. The term or terms chosen for this paper is:';
+                    $significance = !empty($resultSignificance['formattedDescription']) ? new Term('Significance of the findings:', implode("\n", $resultSignificance['formattedDescription']), $resultSignificance['highlightedTerm'], $significanceAriaLable) : null;
+                    $strength = !empty($resultStrength['formattedDescription']) ? new Term('Strength of evidence:', implode("\n", $resultStrength['formattedDescription']), $resultStrength['highlightedTerm'], $strengthAriaLable) : null;
 
                     $parts[] = ArticleSection::collapsible(
                         'elife-assessment',
                         $item->getElifeAssessmentTitle(),
                         2,
                         $this->render(...$this->convertContent($item->getElifeAssessment(), 2, $context)),
-                        $relatedLinks,
+                        null,
                         ArticleSection::STYLE_HIGHLIGHTED,
                         false,
                         $first,
                         $item->getElifeAssessment()->getDoi() ? new Doi($item->getElifeAssessment()->getDoi()) : null,
-                        ArticleSection::RELATED_LINKS_SEPARATOR_CIRCLE
+                        null,
+                        new Assessment(
+                            $significance,
+                            $strength,
+                            $summary
+                        )
                     );
 
                     $first = false;
@@ -1970,4 +1983,54 @@ private function generatePublicationHistoryForNewVor($history) {
 
         return $publicationHistory;
     }
+
+    private function highlightAndFormatTerms($content, array $terms): array {
+        $formattedDescription = [];
+        $highlightedWords = [];
+
+        foreach ($content as $contentItem) {
+            if (method_exists($contentItem, 'getText')) {
+                $text = $contentItem->getText();
+
+                preg_match_all('/<b>(.*?)<\/b>/', $text, $matches);
+
+                if (!empty($matches[1])) {
+                    $highlightedWords = array_merge($highlightedWords, $matches[1]);
+                }
+            }
+        }
+
+        $highlightedTerm = array_map(function ($term) use ($highlightedWords, &$formattedDescription) {
+            $termDescriptions = [
+                'landmark' => 'Findings with profound implications that are expected to have widespread influence',
+                'fundamental' => 'Findings that substantially advance our understanding of major research questions',
+                'important' => 'Findings that have theoretical or practical implications beyond a single subfield',
+                'valuable' => 'Findings that have theoretical or practical implications for a subfield',
+                'useful' => 'Findings that have focused importance and scope',
+                'exceptional' => 'Exemplary use of existing approaches that establish new standards for a field',
+                'compelling' => 'Evidence that features methods, data and analyses more rigorous than the current state-of-the-art',
+                'convincing' => 'Appropriate and validated methodology in line with current state-of-the-art',
+                'solid' => 'Methods, data and analyses broadly support the claims with only minor weaknesses',
+                'incomplete' => 'Main claims are only partially supported',
+                'inadequate' => 'Methods, data and analyses do not support the primary claims',
+            ];
+
+            $termWord = strtolower($term['term']);
+
+            if (in_array($termWord, $highlightedWords)) {
+                $term['isHighlighted'] = true;
+
+                if (isset($termDescriptions[$termWord])) {
+                    $formattedDescription[$termWord] = sprintf("<p><b>%s</b>: %s</p>", ucfirst($termWord), $termDescriptions[$termWord]);
+                }
+            }
+
+            return $term;
+        }, $terms);
+
+        return [
+            'highlightedTerm' => $highlightedTerm,
+            'formattedDescription' => $formattedDescription
+        ];
+    }
 }