GitHub - elijahedmondson/QuPath-scripts: A collection of groovy scripts for digital pathology

elijahedmondson / QuPath-scripts Public

Notifications You must be signed in to change notification settings
Fork 1
Star 4

A collection of groovy scripts for digital pathology

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 24 Commits
0.1.0		0.1.0
0.2.3		0.2.3
0.3.0 Annotation Transplant.groovy		0.3.0 Annotation Transplant.groovy
0.3.0 Calculation cell per mm.groovy		0.3.0 Calculation cell per mm.groovy
0.3.0 Merging and assign class.groovy		0.3.0 Merging and assign class.groovy
0.3.0 Merging.groovy		0.3.0 Merging.groovy
0.3.0 Microvessel CD31.groovy		0.3.0 Microvessel CD31.groovy
0.3.0 Pixel H-score.groovy		0.3.0 Pixel H-score.groovy
0.3.0 Simple Calculations.groovy		0.3.0 Simple Calculations.groovy
0.3.3 Autofluorescence removal.groovy		0.3.3 Autofluorescence removal.groovy
0.3.3 Clear Memory.groovy		0.3.3 Clear Memory.groovy
0.3.3 Create New Project		0.3.3 Create New Project
0.3.3 DAB Threshold.groovy		0.3.3 DAB Threshold.groovy
0.3.3 Export Overlay.groovy		0.3.3 Export Overlay.groovy
0.3.3 Fluor Channel Intensities.groovy		0.3.3 Fluor Channel Intensities.groovy
0.3.3 StarDist Fluorescent.groovy		0.3.3 StarDist Fluorescent.groovy
0.3.3 StarDist filter and measure.groovy		0.3.3 StarDist filter and measure.groovy
0.3.3 StarDist simple.groovy		0.3.3 StarDist simple.groovy
0.3.3 StarDist.groovy		0.3.3 StarDist.groovy
0.3.3 Threshold.groovy		0.3.3 Threshold.groovy
0.4.0 Calculation % Positive.groovy		0.4.0 Calculation % Positive.groovy
0.4.0 Export Binary Masks.groovy		0.4.0 Export Binary Masks.groovy
0.4.0 Remove Annotations.groovy		0.4.0 Remove Annotations.groovy
0.5.0 Channel Names.groovy		0.5.0 Channel Names.groovy
0.5.0 Pixelwise H-score slow.groovy		0.5.0 Pixelwise H-score slow.groovy
0.5.0 Pixelwise H-score.groovy		0.5.0 Pixelwise H-score.groovy
0.5.0 Region Export.groovy		0.5.0 Region Export.groovy
0.5.0 Stardist.groovy		0.5.0 Stardist.groovy
AR.groovy		AR.groovy
CD206.groovy		CD206.groovy
DBSCAN.groovy		DBSCAN.groovy
Pixel H-score PB.groovy		Pixel H-score PB.groovy
Pixel H-score.groovy		Pixel H-score.groovy
Transfer Annotations.groovy		Transfer Annotations.groovy
autoThreshold.groovy		autoThreshold.groovy