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actually use pathfinder

Codecov / codecov/patch succeeded Mar 25, 2024 in 1s

76.59% of diff hit (target 79.09%)

View this Pull Request on Codecov

76.59% of diff hit (target 79.09%)

Annotations

Check warning on line 545 in R/estimate_infections.R

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@codecov codecov / codecov/patch

R/estimate_infections.R#L545

Added line #L545 was not covered by tests

Check warning on line 549 in R/estimate_infections.R

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@codecov codecov / codecov/patch

R/estimate_infections.R#L549

Added line #L549 was not covered by tests

Check warning on line 577 in R/estimate_infections.R

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@codecov codecov / codecov/patch

R/estimate_infections.R#L576-L577

Added lines #L576 - L577 were not covered by tests

Check warning on line 77 in R/extract.R

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@codecov codecov / codecov/patch

R/extract.R#L77

Added line #L77 was not covered by tests

Check warning on line 801 in R/opts.R

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@codecov codecov / codecov/patch

R/opts.R#L800-L801

Added lines #L800 - L801 were not covered by tests

Check warning on line 828 in R/opts.R

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@codecov codecov / codecov/patch

R/opts.R#L826-L828

Added lines #L826 - L828 were not covered by tests

Check warning on line 92 in R/stan.R

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@codecov codecov / codecov/patch

R/stan.R#L92

Added line #L92 was not covered by tests