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espressomd · Oct 20, 2021 · e184ceb · e184ceb
1 parent aacdb4b
commit e184ceb
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Showing 4 changed files with 13 additions and 15 deletions.
diff --git a/src/core/CellStructure.hpp b/src/core/CellStructure.hpp
@@ -504,7 +504,7 @@ struct CellStructure {
    * @brief Set the particle decomposition to HybridDecomposition.
    *
    */
-   void set_hybrid_decomposition(boost::mpi::communicator const &comm,
+  void set_hybrid_decomposition(boost::mpi::communicator const &comm,
                                 double range, BoxGeometry const &box,
                                 LocalBox<double> const &local_geo);
 

diff --git a/src/core/HybridDecomposition.cpp b/src/core/HybridDecomposition.cpp
@@ -29,8 +29,8 @@ HybridDecomposition::HybridDecomposition(boost::mpi::communicator comm,
                                          const BoxGeometry &box_geo,
                                          const LocalBox<double> &local_box)
     : m_comm(std::move(comm)), m_box(box_geo),
-      m_domain_decomposition(DomainDecomposition(m_comm, range,
-                                                      m_box, local_box)),
+      m_domain_decomposition(
+          DomainDecomposition(m_comm, range, m_box, local_box)),
       m_n_square(AtomDecomposition(m_comm, m_box)) {
 
   /* Vector containing cells of both child decompositions */
@@ -52,8 +52,10 @@ HybridDecomposition::HybridDecomposition(boost::mpi::communicator comm,
             exchange_ghosts_comm_n_square.communications.end(),
             std::back_inserter(m_exchange_ghosts_comm.communications));
 
-  m_collect_ghost_force_comm = m_domain_decomposition.collect_ghost_force_comm();
-  auto collect_ghost_force_comm_n_square = m_n_square.collect_ghost_force_comm();
+  m_collect_ghost_force_comm =
+      m_domain_decomposition.collect_ghost_force_comm();
+  auto collect_ghost_force_comm_n_square =
+      m_n_square.collect_ghost_force_comm();
   std::copy(collect_ghost_force_comm_n_square.communications.begin(),
             collect_ghost_force_comm_n_square.communications.end(),
             std::back_inserter(m_collect_ghost_force_comm.communications));

diff --git a/src/core/HybridDecomposition.hpp b/src/core/HybridDecomposition.hpp
@@ -22,10 +22,10 @@
 #ifndef ESPRESSO_HYBRID_DECOMPOSITION_HPP
 #define ESPRESSO_HYBRID_DECOMPOSITION_HPP
 
+#include "AtomDecomposition.hpp"
+#include "DomainDecomposition.hpp"
 #include "Particle.hpp"
 #include "ParticleDecomposition.hpp"
-#include "DomainDecomposition.hpp"
-#include "AtomDecomposition.hpp"
 #include "ghosts.hpp"
 
 #include <utils/Span.hpp>
@@ -38,7 +38,6 @@
 #include <utility>
 #include <vector>
 
-
 class HybridDecomposition : public ParticleDecomposition {
   boost::mpi::communicator m_comm;
   BoxGeometry m_box;
@@ -95,8 +94,7 @@ class HybridDecomposition : public ParticleDecomposition {
     Cell *id_to_cell;
     if (m_n_square_types.find(p.identity()) != m_n_square_types.end()) {
       id_to_cell = m_domain_decomposition.particle_to_cell(p);
-    }
-    else {
+    } else {
       id_to_cell = m_n_square.particle_to_cell(p);
     }
     return id_to_cell;
@@ -105,10 +103,7 @@ class HybridDecomposition : public ParticleDecomposition {
   Utils::Vector3d max_cutoff() const override {
     return m_n_square.max_cutoff();
   }
-
-  Utils::Vector3d max_range() const override {
-    return m_n_square.max_range();
-  }
+  Utils::Vector3d max_range() const override { return m_n_square.max_range(); }
 
   boost::optional<BoxGeometry> minimum_image_distance() const override {
     return m_box;

diff --git a/src/python/espressomd/cellsystem.pyx b/src/python/espressomd/cellsystem.pyx
@@ -63,7 +63,8 @@ cdef class CellSystem:
 
         return True
 
-    def set_hybrid_decomposition(self, n_square_types=[], use_verlet_lists=True):
+    def set_hybrid_decomposition(
+            self, n_square_types=[], use_verlet_lists=True):
         """
         Activates the hybrid domain decomposition.